RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 HM13Q8TCT9 377 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 PEX13Q92968 403 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 C12orf66Q96MD2 445 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 NRSN2Q9GZP1 204 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 STN1Q9H668 368 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 COG4Q9H9E3 785 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 XAB2Q9HCS7 855 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 KLHL3Q9UH77 587 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 RPS6KL1Q9Y6S9 549 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 PIKFYVEQ9Y2I7 2098 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 ASH1LQ9NR48 2969 aaKnown RBP13.52□□□□□ -0.24
TSPAN3-205ENST00000558745 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 C17orf113A0A1B0GUU1 675 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 FAM237BA0A1B0GVD1 139 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 TP73O15350 636 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 RAD51CO43502 376 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 TLX3O43711 291 aaPredicted RBP13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 AP2A2O94973 939 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 ITIH1P19827 911 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 BBS9Q3SYG4 887 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 LYPLAL1Q5VWZ2 237 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 CAPRIN2Q6IMN6 1127 aaKnown RBP13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 PACS1Q6VY07 963 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 CERS6Q6ZMG9 384 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 OR10G6Q8NH81 332 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 ELMO1Q92556 727 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 SH3KBP1Q96B97 665 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 SGSM3Q96HU1 749 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 CCDC74BQ96LY2 380 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 DPH5Q9H2P9 285 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 ACSL5Q9ULC5 683 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 RAXQ9Y2V3 346 aa13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 SMG1Q96Q15 3661 aaKnown RBP13.52□□□□□ -0.25
TSPAN3-205ENST00000558745 MAGEB16A2A368 324 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 EFCAB8A8MWE9 144 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 NDUFS3O75489 264 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 URI1O94763 535 aaPredicted RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 OR56A5P0C7T3 313 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 MTHFD1P11586 935 aaKnown RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 CCL4P13236 92 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 AMD1P17707 334 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 FMO4P31512 558 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 CCR7P32248 378 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 ETV5P41161 510 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 RPL21P46778 160 aaKnown RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 LSSP48449 732 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 LIMK2P53671 638 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 GFERP55789 205 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 CTBP1Q13363 440 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 BOP1Q14137 746 aaKnown RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 TRADDQ15628 312 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 KIAA0930Q6ICG6 404 aaPredicted RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 HIBCHQ6NVY1 386 aaPredicted RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 NEPROQ6NW34 567 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 TMEM71Q6P5X7 295 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 SYDE1Q6ZW31 735 aaPredicted RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 CENPUQ71F23 418 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 RAB11FIP2Q7L804 512 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 PCGF5Q86SE9 256 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 TMEM135Q86UB9 458 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 DENND6AQ8IWF6 608 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 FBXO39Q8N4B4 442 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 WDR36Q8NI36 951 aaKnown RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 RSC1A1Q92681 617 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 FAM136AQ96C01 138 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 NXPE2Q96DL1 559 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 STAMBPL1Q96FJ0 436 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 RUNDC3BQ96NL0 473 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 TMEM74Q96NL1 305 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 FERD3LQ96RJ6 166 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 TTC1Q99614 292 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 WDR83Q9BRX9 315 aaKnown RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 P2RY12Q9H244 342 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 OR52A5Q9H2C5 316 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 POT1Q9NUX5 634 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 CRYL1Q9Y2S2 319 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 LOXL2Q9Y4K0 774 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 APC2O95996 2303 aa13.51□□□□□ -0.25
TSPAN3-205ENST00000558745 CCDC187A0A096LP49 1063 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 UBA6A0AVT1 1052 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 PRMT5O14744 637 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 ZW10O43264 779 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 DUX1O43812 170 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 KIF1CO43896 1103 aaKnown RBP13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 UBXN7O94888 489 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 TNFSF15O95150 251 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 SLC35G4P0C7Q5 338 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 CCKBRP32239 447 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 LEPRP48357 1165 aaKnown RBP13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 EIF3BP55884 814 aaKnown RBP13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 PPP1CAP62136 330 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 GPLD1P80108 840 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 SQSTM1Q13501 440 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms