RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SPAG16Q8N0X2 631 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 OR10H5Q8NGA6 315 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 S100PBPQ96BU1 408 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 LENG8Q96PV6 779 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 GTPBP2Q9BX10 602 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 FAM105AQ9NUU6 356 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 SCGB1D2O95969 90 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 ZNF8P17098 575 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 ARCN1P48444 511 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 LSM12Q3MHD2 195 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 RAB12Q6IQ22 244 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 BEND5Q7L4P6 421 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 SPATA22Q8NHS9 363 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 SCLYQ96I15 445 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 AGO3Q9H9G7 860 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 VIPP01282 170 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 GJA1P17302 382 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 CDH5P33151 784 aaPredicted RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 TIE1P35590 1138 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 FMO1Q01740 532 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 DSC2Q02487 901 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 CHAF1BQ13112 559 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 UBE2E3Q969T4 207 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 PNO1Q9NRX1 252 aaKnown RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 DNAJC28Q9NX36 388 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 AASSQ9UDR5 926 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 ALG5Q9Y673 324 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 KANTRA0A1W2PQU2 76 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 FADS2P1A8MWK0 482 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 OR1F1O43749 312 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 DGKEP52429 567 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 CDH15P55291 814 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 SKP1P63208 163 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 C2orf80Q0P641 193 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 GPR135Q8IZ08 494 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 PGAM4Q8N0Y7 254 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 TIMM8BQ9Y5J9 83 aaPredicted RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 FXYD6-FXYD2A0A087WZ82 144 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 APODP05090 189 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 KCNA5P22460 613 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 C2orf27AQ580R0 203 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 ZDHHC20Q5W0Z9 365 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 USP50Q70EL3 339 aaPredicted RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 ARL14EPQ8N8R7 260 aaPredicted RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 OR5T3Q8NGG3 340 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 SLC16A10Q8TF71 515 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 BARD1Q99728 777 aaKnown RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 FXYD6Q9H0Q3 95 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 KCND1Q9NSA2 647 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 METTL21EPA6NDL7 271 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 KMOO15229 486 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 LPOP22079 712 aaPredicted RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 C1orf186Q6ZWK4 172 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 UBR7Q8N806 425 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 SHC3Q92529 594 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 OSBPL7Q9BZF2 842 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 ZNF639Q9UID6 485 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 YARS2Q9Y2Z4 477 aaKnown RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 FGF10O15520 208 aaPredicted RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 UROSP10746 265 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 RORCP51449 518 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 RTL4Q6ZR62 310 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 OR10H4Q8NGA5 316 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 SMG7Q92540 1137 aaKnown RBP13.79□□□□□ -0.2
SPG11-210ENST00000558319 MTMR9Q96QG7 549 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 OR51V1Q9H2C8 321 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 FBXO5Q9UKT4 447 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 ADGRB3O60242 1522 aa13.79□□□□□ -0.2
SPG11-210ENST00000558319 KHNYNO15037 678 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 ALOX15BO15296 676 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 ADH1CP00326 375 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 CXCR2P25025 360 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 DCST1Q5T197 706 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 RIOX2Q8IUF8 465 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 EGFL6Q8IUX8 553 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 ZNF781Q8N8C0 355 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 SIDT2Q8NBJ9 832 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 MGME1Q9BQP7 344 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 VWA7Q9Y334 891 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 IDH3AP50213 366 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 RNASEH2BQ5TBB1 312 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 C9orf57Q5W0N0 161 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 OR10A6Q8NH74 314 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 TMCO6Q96DC7 493 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 DUS2Q9NX74 493 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 PCDH10Q9P2E7 1040 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 CDC42BPAQ5VT25 1732 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 DHX15O43143 795 aaKnown RBP13.78□□□□□ -0.2
SPG11-210ENST00000558319 MAGEC1O60732 1142 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 LRP8Q14114 963 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 ANKRD26P1Q6NSI1 321 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 SLC43A3Q8NBI5 491 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 CRELD1Q96HD1 420 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 PREBQ9HCU5 417 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 MARK1Q9P0L2 795 aa13.78□□□□□ -0.2
SPG11-210ENST00000558319 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms