RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ALKBH2Q6NS38 261 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 EPGNQ6UW88 154 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 CYHR1Q6ZMK1 362 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 EP400NLQ6ZTU2 488 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 Q6ZVL8 140 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 CLNKQ7Z7G1 428 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 ATCAYQ86WG3 371 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 NKAPQ8N5F7 415 aaKnown RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 CCNYL1Q8N7R7 359 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 PTGR2Q8N8N7 351 aaPredicted RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 SMRP1Q8NCR6 262 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 RHEBL1Q8TAI7 183 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 PIP4K2CQ8TBX8 421 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 PPP4R1Q8TF05 950 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 SREK1Q8WXA9 508 aaKnown RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 OR8D1Q8WZ84 308 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 INPP5DQ92835 1189 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 FUBP1Q96AE4 644 aaKnown RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 ERLEC1Q96DZ1 483 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 LINGO1Q96FE5 620 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 PDLIM5Q96HC4 596 aaKnown RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 COQ10AQ96MF6 247 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 PLEKHG4BQ96PX9 1271 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 LRRC37BQ96QE4 947 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 TRMT61BQ9BVS5 477 aaKnown RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 CLPBQ9H078 707 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 ILKAPQ9H0C8 392 aaPredicted RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 RASSF4Q9H2L5 321 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 FAM83DQ9H4H8 585 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 ACTR5Q9H9F9 607 aaPredicted RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 SARS2Q9NP81 518 aaKnown RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 PRSS16Q9NQE7 514 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 SMOXQ9NWM0 555 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 DNAJC28Q9NX36 388 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 CACNA2D2Q9NY47 1150 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 PKD2L2Q9NZM6 624 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 NFKBIL1Q9UBC1 381 aaPredicted RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 SUN2Q9UH99 717 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 GNPTGQ9UJJ9 305 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 ZFP69BQ9UJL9 534 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 RAP2CQ9Y3L5 183 aa7.27□□□□□ -1.25
SPG11-204ENST00000557866 NUP210Q8TEM1 1887 aaPredicted RBP7.27□□□□□ -1.25
SPG11-204ENST00000557866 RGSL1A5PLK6 1076 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 CAPN14A8MX76 684 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 TMEM233B4DJY2 109 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 E5RI56 91 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 K7EQS6 105 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 MYO1CO00159 1063 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 BTN3A1O00481 513 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 KLK8O60259 260 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 MTX2O75431 263 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 DNAJC8O75937 253 aaPredicted RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 FSBPO95073 299 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 ALX3O95076 343 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 SLC25A14O95258 325 aaPredicted RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 SIX3O95343 332 aaPredicted RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 TRIM16O95361 564 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 CBX6O95503 412 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 APODP05090 189 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 JUNP05412 331 aaKnown RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 TPBGLP0DKB5 382 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 HNRNPLP14866 589 aaKnown RBP eCLIP7.26□□□□□ -1.25
SPG11-204ENST00000557866 TSPAN8P19075 237 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 POU3F3P20264 500 aaPredicted RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 XPAP23025 273 aaPredicted RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 PPARGP37231 505 aaPredicted RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 SKIV2L2P42285 1042 aaKnown RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 WASP42768 502 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 LIG3P49916 1009 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 IL2P60568 153 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 ZBTB16Q05516 673 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 ASPHQ12797 758 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 PRKAA1Q13131 559 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 ENPP2Q13822 863 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 ARHGEF7Q14155 803 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 ELAVL3Q14576 367 aaKnown RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 KRT72Q14CN4 511 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 PFKFB4Q16877 469 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 AAK1Q2M2I8 961 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 SLC9B1Q4ZJI4 515 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 C2orf27AQ580R0 203 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 FAM91A1Q658Y4 838 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 TXNDC11Q6PKC3 985 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 SERPINA13PQ6UXR4 307 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 FRMD7Q6ZUT3 714 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 PIWIL4Q7Z3Z4 852 aaKnown RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 MMAAQ8IVH4 418 aaKnown RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 SLC22A9Q8IVM8 553 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 PELI3Q8N2H9 469 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 TRAM1L1Q8N609 369 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 GBP7Q8N8V2 638 aaPredicted RBP7.26□□□□□ -1.25
SPG11-204ENST00000557866 STAG3L4Q8TBR4 150 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 AGR3Q8TD06 166 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 DTX3LQ8TDB6 740 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 UCMAQ8WVF2 138 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 EXT2Q93063 718 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 PMEPA1Q969W9 287 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 ULK4Q96C45 1275 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 CCDC126Q96EE4 140 aa7.26□□□□□ -1.25
SPG11-204ENST00000557866 L3HYPDHQ96EM0 354 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms