RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 MAGEB18Q96M61 343 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 SLC6A18Q96N87 628 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 IER2Q9BTL4 223 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 TFB2MQ9H5Q4 396 aaKnown RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 CYP4F12Q9HCS2 524 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 FGF22Q9HCT0 170 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 UTP6Q9NYH9 597 aaKnown RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 EIF2B4Q9UI10 523 aaKnown RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 PNMA8BQ9ULN7 279 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 SUFUQ9UMX1 484 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 GPR34Q9UPC5 381 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 SLC17A4Q9Y2C5 497 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 PLEKHM1Q9Y4G2 1056 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 HS3ST3A1Q9Y663 406 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ABCA7Q8IZY2 2146 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 SLC5A10A0PJK1 596 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 TCP11X1B4DZS4 312 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 F8W8V4 182 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 LAMTOR5O43504 91 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 TAC1P20366 129 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 GNPDA1P46926 289 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 KPNA2P52292 529 aaKnown RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 HK3P52790 923 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ARHGAP8P85298 464 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 CSTF1Q05048 431 aaKnown RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 ABRQ12979 859 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 SRSF5Q13243 272 aaKnown RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 GBX1Q14549 363 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 NFATC4Q14934 902 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 CHI3L2Q15782 390 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ZNF658BQ4V348 819 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 PLEKHS1Q5SXH7 462 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ZYG11AQ6WRX3 759 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ARMCX6Q7L4S7 300 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 C1orf210Q8IVY1 113 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 SLC22A18ASQ8N1D0 253 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 CFAP61Q8NHU2 1237 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 STAG3L4Q8TBR4 150 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 TSACCQ96A04 125 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 TMEM159Q96B96 161 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 PDXPQ96GD0 296 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ZNF514Q96K75 400 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 SPACA7Q96KW9 195 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 LINC00615Q96LM1 132 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 HSPA12BQ96MM6 686 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ATOH8Q96SQ7 321 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 MIR1-1HGQ9H1L0 117 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 MANSC1Q9H8J5 431 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ZNF395Q9H8N7 513 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 SLCO1B3Q9NPD5 702 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 AASDHPPTQ9NRN7 309 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 KLHL42Q9P2K6 505 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 RAPGEFL1Q9UHV5 662 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 RNF112Q9ULX5 631 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 GPSM3Q9Y4H4 160 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 SDK1Q7Z5N4 2213 aa10□□□□□ -0.81
SRP54-208ENST00000555557 KRT87PA6NCN2 255 aa10□□□□□ -0.81
SRP54-208ENST00000555557 MGAT4DA6NG13 374 aa10□□□□□ -0.81
SRP54-208ENST00000555557 A6NNZ2 444 aa10□□□□□ -0.81
SRP54-208ENST00000555557 KPNA5O15131 536 aa10□□□□□ -0.81
SRP54-208ENST00000555557 SLCO2B1O94956 709 aa10□□□□□ -0.81
SRP54-208ENST00000555557 FGF3P11487 239 aaPredicted RBP10□□□□□ -0.81
SRP54-208ENST00000555557 ACP5P13686 325 aa10□□□□□ -0.81
SRP54-208ENST00000555557 MTHFD2P13995 350 aa10□□□□□ -0.81
SRP54-208ENST00000555557 SF3A3Q12874 501 aaKnown RBP eCLIP10□□□□□ -0.812e-10■■■■□ 21
SRP54-208ENST00000555557 PYCR3Q53H96 274 aa10□□□□□ -0.81
SRP54-208ENST00000555557 SBSNQ6UWP8 590 aa10□□□□□ -0.81
SRP54-208ENST00000555557 ABI3BPQ7Z7G0 1075 aa10□□□□□ -0.81
SRP54-208ENST00000555557 AMZ2Q86W34 360 aa10□□□□□ -0.81
SRP54-208ENST00000555557 CADM4Q8NFZ8 388 aa10□□□□□ -0.81
SRP54-208ENST00000555557 OR56A4Q8NGH8 313 aa10□□□□□ -0.81
SRP54-208ENST00000555557 OR2L2Q8NH16 312 aa10□□□□□ -0.81
SRP54-208ENST00000555557 RHEBL1Q8TAI7 183 aa10□□□□□ -0.81
SRP54-208ENST00000555557 LRRC8CQ8TDW0 803 aa10□□□□□ -0.81
SRP54-208ENST00000555557 OR1E3Q8WZA6 343 aa10□□□□□ -0.81
SRP54-208ENST00000555557 YY1AP1Q9H869 796 aa10□□□□□ -0.81
SRP54-208ENST00000555557 COG4Q9H9E3 785 aa10□□□□□ -0.81
SRP54-208ENST00000555557 CARS2Q9HA77 564 aaKnown RBP10□□□□□ -0.81
SRP54-208ENST00000555557 PRMT8Q9NR22 394 aaPredicted RBP10□□□□□ -0.81
SRP54-208ENST00000555557 OXSMQ9NWU1 459 aa10□□□□□ -0.81
SRP54-208ENST00000555557 SIRPGQ9P1W8 387 aa10□□□□□ -0.81
SRP54-208ENST00000555557 DMTF1Q9Y222 760 aa10□□□□□ -0.81
SRP54-208ENST00000555557 C17orf113A0A1B0GUU1 675 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 PRSS38A1L453 326 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 A8MT66 165 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 MEI4A8MW99 385 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 SUPT3HB4E1H0 165 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 KMOO15229 486 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 BIRC5O15392 142 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 SHOX2O60902 331 aaPredicted RBP9.99□□□□□ -0.81
SRP54-208ENST00000555557 KERAO60938 352 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 SUPT3HO75486 399 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 GUCA1CO95843 209 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 VIMP08670 466 aaKnown RBP9.99□□□□□ -0.81
SRP54-208ENST00000555557 HOXC4P09017 264 aaPredicted RBP9.99□□□□□ -0.81
SRP54-208ENST00000555557 THEGLP0DJG4 465 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 CBSLP0DN79 551 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 TDGF1P13385 188 aa9.99□□□□□ -0.81
SRP54-208ENST00000555557 ENO3P13929 434 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms