RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 AP4S1Q9Y587 144 aa23.87■■□□□ 1.41
TMEM260-207ENST00000555497 EPCAMP16422 314 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 CCR7P32248 378 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 IRS1P35568 1242 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 ABRAXAS2Q15018 415 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 ZNF77Q15935 545 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 PDCD4Q53EL6 469 aaKnown RBP23.86■■□□□ 1.41
TMEM260-207ENST00000555497 RARS2Q5T160 578 aaKnown RBP23.86■■□□□ 1.41
TMEM260-207ENST00000555497 PBXIP1Q96AQ6 731 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 WNT6Q9Y6F9 365 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 ATP6V1B2P21281 511 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 SPINT3P49223 89 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 FOLH1Q04609 750 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 ATP6AP1LQ52LC2 224 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 FBXO46Q6PJ61 603 aaPredicted RBP23.86■■□□□ 1.41
TMEM260-207ENST00000555497 MILR1Q7Z6M3 343 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 PHC3Q8NDX5 983 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 PROKR1Q8TCW9 393 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 NUDT8Q8WV74 236 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 BADQ92934 168 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 COPS8Q99627 209 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 CCT7Q99832 543 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 CD244Q9BZW8 370 aa23.86■■□□□ 1.41
TMEM260-207ENST00000555497 CLGNO14967 610 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 OTCP00480 354 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 DDX6P26196 483 aaKnown RBP eCLIP23.85■■□□□ 1.415e-6■■■■■ 46.6
TMEM260-207ENST00000555497 KCNK10P57789 538 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 IRX1P78414 480 aaPredicted RBP23.85■■□□□ 1.41
TMEM260-207ENST00000555497 COQ5Q5HYK3 327 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 GDPD4Q6W3E5 623 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 DHFR2Q86XF0 187 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 FAM110BQ8TC76 370 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 SP7Q8TDD2 431 aaPredicted RBP23.85■■□□□ 1.41
TMEM260-207ENST00000555497 TSPEARQ8WU66 669 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 CYB5D2Q8WUJ1 264 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 BTBD9Q96Q07 612 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 PFDN4Q9NQP4 134 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 WWOXQ9NZC7 414 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 SLAMF8Q9P0V8 285 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 PCDHA9Q9Y5H5 950 aa23.85■■□□□ 1.41
TMEM260-207ENST00000555497 IGLV3-16A0A075B6K0 115 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 LSM1O15116 133 aaKnown RBP23.84■■□□□ 1.41
TMEM260-207ENST00000555497 PIK3CGP48736 1102 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 POLR2JP52435 117 aaKnown RBP23.84■■□□□ 1.41
TMEM260-207ENST00000555497 MED21Q13503 144 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 TLR1Q15399 786 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 ARHGAP15Q53QZ3 475 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 ZNF697Q5TEC3 545 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 SULT1C3Q6IMI6 304 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 ADCY4Q8NFM4 1077 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 LRTOMTQ8WZ04 291 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 RAD9AQ99638 391 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 VCXQ9H320 206 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 GID8Q9NWU2 228 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 KCTD5Q9NXV2 234 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 LZTS1Q9Y250 596 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 CCL27Q9Y4X3 112 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 AAK1Q2M2I8 961 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 MAP7D1Q3KQU3 841 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 PRMT9Q6P2P2 845 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 DET1Q7L5Y6 550 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 DUS3LQ96G46 650 aaKnown RBP23.84■■□□□ 1.41
TMEM260-207ENST00000555497 MTG2Q9H4K7 406 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 ACTL8Q9H568 366 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 ERVW-1Q9UQF0 538 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 AK5Q9Y6K8 562 aa23.84■■□□□ 1.41
TMEM260-207ENST00000555497 EEDO75530 441 aaKnown RBP23.83■■□□□ 1.41
TMEM260-207ENST00000555497 NFYCQ13952 458 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 CAMK1Q14012 370 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 CBX2Q14781 532 aaPredicted RBP23.83■■□□□ 1.41
TMEM260-207ENST00000555497 TMEM240Q5SV17 173 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 DNAJB14Q8TBM8 379 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 TMEM125Q96AQ2 219 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 SEMA6AQ9H2E6 1030 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 HEBP1Q9NRV9 189 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 FARSBQ9NSD9 589 aaKnown RBP23.83■■□□□ 1.41
TMEM260-207ENST00000555497 ZIM2Q9NZV7 527 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 OPTCQ9UBM4 332 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 EGFL7Q9UHF1 273 aa23.83■■□□□ 1.41
TMEM260-207ENST00000555497 ZNF839A8K0R7 811 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 TTC34A8MYJ7 566 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 WASH3PC4AMC7 463 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 TXNDC9O14530 226 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 FFAR3O14843 346 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 GPR42O15529 346 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 MAP3K13O43283 966 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 NR6A1Q15406 480 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 TIGD2Q4W5G0 525 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 RFTN2Q52LD8 501 aaPredicted RBP23.83■■□□□ 1.4
TMEM260-207ENST00000555497 RABL3Q5HYI8 236 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 HABP4Q5JVS0 413 aaKnown RBP23.83■■□□□ 1.4
TMEM260-207ENST00000555497 PRSS36Q5K4E3 855 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 ELMSAN1Q6PJG2 1045 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 FRS2Q8WU20 508 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 UBTD2Q8WUN7 234 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 ING5Q8WYH8 240 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 MRGPRX3Q96LB0 322 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 RDH14Q9HBH5 336 aa23.83■■□□□ 1.4
TMEM260-207ENST00000555497 CCDC154A6NI56 674 aa23.82■■□□□ 1.4
TMEM260-207ENST00000555497 FGF19O95750 216 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms