RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SLC45A3Q96JT2 553 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 SLC41A2Q96JW4 573 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 DNAJC1Q96KC8 554 aaKnown RBP11.57□□□□□ -0.56
VRK1-204ENST00000555351 CATSPER2Q96P56 530 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 TGM7Q96PF1 710 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 RANBP9Q96S59 729 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 INSM2Q96T92 566 aaPredicted RBP11.57□□□□□ -0.56
VRK1-204ENST00000555351 WWP1Q9H0M0 922 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 HOMER3Q9NSC5 361 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 PAK5Q9P286 719 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 PSMD13Q9UNM6 376 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 ZNF148Q9UQR1 794 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 DRG1Q9Y295 367 aaKnown RBP11.57□□□□□ -0.56
VRK1-204ENST00000555351 MGAQ8IWI9 3026 aa11.57□□□□□ -0.56
VRK1-204ENST00000555351 OR5K3A6NET4 321 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 TLCD2A6NGC4 264 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 AGRPO00253 132 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 RASSF9O75901 435 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 STK17BO94768 372 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 DLGAP3O95886 979 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 FGF5P12034 268 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 NSG1P42857 185 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 LEPRP48357 1165 aaKnown RBP11.56□□□□□ -0.56
VRK1-204ENST00000555351 PLOD1Q02809 727 aaPredicted RBP11.56□□□□□ -0.56
VRK1-204ENST00000555351 ACVR1Q04771 509 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 POU6F1Q14863 301 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.56□□□□□ -0.56
VRK1-204ENST00000555351 ZRANB3Q5FWF4 1079 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 CACHD1Q5VU97 1274 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 KIAA1614Q5VZ46 1190 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 ARMC3Q5W041 872 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 CERS6Q6ZMG9 384 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 DET1Q7L5Y6 550 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 VASH2Q86V25 355 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 SERPINA9Q86WD7 417 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 ZNF843Q8N446 348 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 ESX1Q8N693 406 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 GPR150Q8NGU9 434 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 ATG4AQ8WYN0 398 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 KIAA1143Q96AT1 154 aaPredicted RBP11.56□□□□□ -0.56
VRK1-204ENST00000555351 C12orf66Q96MD2 445 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 TTC1Q99614 292 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 SLC12A9Q9BXP2 914 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 FAM117AQ9C073 453 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 ETNK1Q9HBU6 452 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 EIF2B3Q9NR50 452 aaKnown RBP11.56□□□□□ -0.56
VRK1-204ENST00000555351 IMP3Q9NV31 184 aaKnown RBP11.56□□□□□ -0.56
VRK1-204ENST00000555351 KLHL3Q9UH77 587 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 SLC24A2Q9UI40 661 aa11.56□□□□□ -0.56
VRK1-204ENST00000555351 ZNF891A8MT65 544 aaPredicted RBP11.55□□□□□ -0.56
VRK1-204ENST00000555351 E7EVH7 732 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 LIN7AO14910 233 aaPredicted RBP11.55□□□□□ -0.56
VRK1-204ENST00000555351 KALRNO60229 2985 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 MT-ND3P03897 115 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 TPH1P17752 444 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 ADRA1DP25100 572 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 MSNP26038 577 aaKnown RBP11.55□□□□□ -0.56
VRK1-204ENST00000555351 PBLDP30039 288 aaPredicted RBP11.55□□□□□ -0.56
VRK1-204ENST00000555351 PPARGP37231 505 aaPredicted RBP11.55□□□□□ -0.56
VRK1-204ENST00000555351 TMPRSS15P98073 1019 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 MC1RQ01726 317 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 SEPT6Q14141 434 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 SIX1Q15475 284 aaPredicted RBP11.55□□□□□ -0.56
VRK1-204ENST00000555351 IRGCQ6NXR0 463 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 OOSP2Q86WS3 158 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 CFAP206Q8IYR0 622 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 CCDC89Q8N998 374 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 DNAAF3Q8N9W5 541 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 ACVR1CQ8NER5 493 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 OR8K5Q8NH50 307 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 C1orf54Q8WWF1 131 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.55□□□□□ -0.56
VRK1-204ENST00000555351 RMDN2Q96LZ7 410 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 OR52A5Q9H2C5 316 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 MVB12BQ9H7P6 319 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 COG4Q9H9E3 785 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 CASS4Q9NQ75 786 aa11.55□□□□□ -0.56
VRK1-204ENST00000555351 IFRD1O00458 451 aaPredicted RBP11.54□□□□□ -0.56
VRK1-204ENST00000555351 RECKO95980 971 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 IFNB1P01574 187 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 FTH1P02794 183 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 MSL3P1P0C860 447 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 LIFP15018 202 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 WT1P19544 449 aaPredicted RBP11.54□□□□□ -0.56
VRK1-204ENST00000555351 FOXN2P32314 431 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 STAT5AP42229 794 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 LMAN1P49257 510 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 CDK16Q00536 496 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 ACY1Q03154 408 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 FOXM1Q08050 763 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 SRSF6Q13247 344 aaKnown RBP11.54□□□□□ -0.56
VRK1-204ENST00000555351 GSE1Q14687 1217 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 DBN1Q16643 649 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 LINC00303Q3SY05 128 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 DNTTIP2Q5QJE6 756 aaKnown RBP11.54□□□□□ -0.56
VRK1-204ENST00000555351 ARMC6Q6NXE6 501 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 AFTPHQ6ULP2 937 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 PPP1R21Q6ZMI0 780 aa11.54□□□□□ -0.56
VRK1-204ENST00000555351 FAM92BQ6ZTR7 304 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms