RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 FANCGO15287 622 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 RRP8O43159 456 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 DUX1O43812 170 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KIF1CO43896 1103 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PRAMEF10O60809 474 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PHF2O75151 1096 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 THRAP10827 490 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TPSB2P20231 275 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MAGEA6P43360 314 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 EPHA4P54764 986 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CDK16Q00536 496 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TPSAB1Q15661 275 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PAPD7Q5XG87 772 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 NLRP9Q7RTR0 991 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ARHGAP22Q7Z5H3 698 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CAND1Q86VP6 1230 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CREG2Q8IUH2 290 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PPHLN1Q8NEY8 458 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 RSC1A1Q92681 617 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PMEPA1Q969W9 287 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MFSD3Q96ES6 412 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 RMDN2Q96LZ7 410 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 C12orf66Q96MD2 445 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TGM7Q96PF1 710 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 DPYSL5Q9BPU6 564 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TRIM56Q9BRZ2 755 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 IL22Q9GZX6 179 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TREX1Q9NSU2 369 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 POT1Q9NUX5 634 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PKD1L2Q7Z442 2459 aa12.14□□□□□ -0.47
TRAPPC6B-205ENST00000555269 C17orf113A0A1B0GUU1 675 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 EFCAB7A8K855 629 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 C9orf172C9J069 976 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 GOLGA8KD6RF30 607 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 GOLGA8TH3BQL2 631 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CD3EAPO15446 510 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CAPN5O15484 640 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TMEM63AO94886 807 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 AP2A2O94973 939 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MTHFD1P11586 935 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TCP1P17987 556 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ITGB6P18564 788 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CSTF2P33240 577 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 NSG1P42857 185 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PREPP48147 710 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 LEPRP48357 1165 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PCBP4P57723 403 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PPP1CAP62136 330 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PRAMEP78395 509 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TRA2AQ13595 282 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TGIF1Q15583 401 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FASTKD1Q53R41 847 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 AFTPHQ6ULP2 937 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CLEC14AQ86T13 490 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ZFAND4Q86XD8 727 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SPNS2Q8IVW8 549 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SPACA3Q8IXA5 215 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 AVL9Q8NBF6 648 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ZNF248Q8NDW4 579 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 HM13Q8TCT9 377 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TMEM159Q96B96 161 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FERD3LQ96RJ6 166 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KIFC1Q9BW19 673 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 DDX47Q9H0S4 455 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 OR52A5Q9H2C5 316 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FOXJ2Q9P0K8 574 aa12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 AKAP7Q9P0M2 348 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC6B-205ENST00000555269 IQCF5A8MTL0 148 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 AP3B1O00203 1094 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 HGSO14964 777 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 NVLO15381 856 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KLK10O43240 276 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 VAPBO95292 243 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 C9P02748 559 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SLC35G4P0C7Q5 338 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ARNTP27540 789 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PTGIRP43119 386 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FNTAP49354 379 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SEPHS1P49903 392 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CSE1LP55060 971 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TLE3Q04726 772 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KRT33BQ14525 404 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ITIH4Q14624 930 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 LYPLAL1Q5VWZ2 237 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FAM129CQ86XR2 697 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PLXDC1Q8IUK5 500 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KLHL7Q8IXQ5 586 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 RBM12BQ8IXT5 1001 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 AGGF1Q8N302 714 aaeCLIP12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KCNE4Q8WWG9 221 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ART4Q93070 314 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 RNF31Q96EP0 1072 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SGSM3Q96HU1 749 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 C9orf72Q96LT7 481 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms