RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TMEM9Q9P0T7 183 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 ACSL5Q9ULC5 683 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 WDR37Q9Y2I8 494 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 NBEAQ8NFP9 2946 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
SHMT2-211ENST00000554310 SGTAO43765 313 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 UBXN7O94888 489 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 GSTM1P09488 218 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 ANKRD34CP0C6C1 535 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 SLC35G4P0C7Q5 338 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 MTHFD1P11586 935 aaKnown RBP12.79□□□□□ -0.36
SHMT2-211ENST00000554310 ATP1B2P14415 290 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-211ENST00000554310 ADRA1DP25100 572 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 MPSTP25325 297 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 GRIA1P42261 906 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 CAPZBP47756 277 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 ARSDP51689 593 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 MAPK10P53779 464 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 TMPRSS3P57727 454 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 GSTM4Q03013 218 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 ACVR1Q04771 509 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 GPR18Q14330 331 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 ITIH4Q14624 930 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 CLCA4Q14CN2 919 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 RPE65Q16518 533 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 DBN1Q16643 649 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 CCDC38Q502W7 563 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 TSTD2Q5T7W7 516 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 BROXQ5VW32 411 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 PACS1Q6VY07 963 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 TAS2R42Q7RTR8 314 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 PPHLN1Q8NEY8 458 aaKnown RBP12.79□□□□□ -0.36
SHMT2-211ENST00000554310 OR13J1Q8NGT2 312 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 NAF1Q96HR8 494 aaKnown RBP12.79□□□□□ -0.36
SHMT2-211ENST00000554310 IMP3Q9NV31 184 aaKnown RBP12.79□□□□□ -0.36
SHMT2-211ENST00000554310 SMARCAL1Q9NZC9 954 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 TCAF1Q9Y4C2 921 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 PCDHGA3Q9Y5H0 932 aa12.79□□□□□ -0.36
SHMT2-211ENST00000554310 PRAMEF33A0A0G2JMD5 474 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 C17orf113A0A1B0GUU1 675 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 CCDC78A2IDD5 438 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 CCDC162PA2VCL2 907 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 B4E171 279 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 AGRPO00253 132 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 QSOX1O00391 747 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 TOX3O15405 576 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-211ENST00000554310 KLK10O43240 276 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 PRAMEF10O60809 474 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 SASH3O75995 380 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 AP2A2O94973 939 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 C9P02748 559 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 LIPCP11150 499 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 TPSB2P20231 275 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 FOXN2P32314 431 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 ETV5P41161 510 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 TSPAN7P41732 249 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 NSG1P42857 185 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 KCNJ1P48048 391 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 CDKN1CP49918 316 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-211ENST00000554310 RAB15P59190 212 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 CDK16Q00536 496 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 TPSAB1Q15661 275 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 LYPLAL1Q5VWZ2 237 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 KLHL35Q6PF15 583 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 ARHGAP22Q7Z5H3 698 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 PIANPQ8IYJ0 282 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 GPR150Q8NGU9 434 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 NAT14Q8WUY8 206 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 CCM2Q9BSQ5 444 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 DDA1Q9BW61 102 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 IL22Q9GZX6 179 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 WWP1Q9H0M0 922 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 FOXJ2Q9P0K8 574 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 PSMD13Q9UNM6 376 aa12.78□□□□□ -0.36
SHMT2-211ENST00000554310 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-211ENST00000554310 GOLGA6L10A0A0M3HER8 536 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 C9orf172C9J069 976 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-211ENST00000554310 PRSS56P0CW18 603 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 FGF3P11487 239 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-211ENST00000554310 CCL4P13236 92 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 TYRP1P17643 537 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 AMD1P17707 334 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 GFERP55789 205 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 PRAMEP78395 509 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 RPA4Q13156 261 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 CLN3Q13286 438 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 PLCL1Q15111 1095 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 CYP1B1Q16678 543 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 AARS2Q5JTZ9 985 aaKnown RBP12.77□□□□□ -0.37
SHMT2-211ENST00000554310 PCID2Q5JVF3 399 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 SNAP47Q5SQN1 464 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 XKR5Q6UX68 686 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 CERS6Q6ZMG9 384 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 FAM129CQ86XR2 697 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 ZFPM2Q8WW38 1151 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 RSC1A1Q92681 617 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 USP7Q93009 1102 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 SGSM3Q96HU1 749 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 C9orf72Q96LT7 481 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms