RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FKBP9P1Q75LS8 142 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MTSS1LQ765P7 747 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF534Q76KX8 674 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 GET4Q7L5D6 327 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CATSPER4Q7RTX7 472 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CLEC14AQ86T13 490 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 LINC00523Q86TU6 105 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF280BQ86YH2 543 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TICAM1Q8IUC6 712 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 GPR65Q8IYL9 337 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 RNF168Q8IYW5 571 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 EMC1Q8N766 993 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 LRRC52Q8N7C0 313 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TXNDC5Q8NBS9 432 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZBTB44Q8NCP5 570 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF420Q8TAQ5 688 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PNPT1Q8TCS8 783 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PYDC1Q8WXC3 89 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ASB15Q8WXK1 588 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 POP5Q969H6 163 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF707Q96C28 371 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ASB9Q96DX5 294 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PRR11Q96HE9 360 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MPP4Q96JB8 637 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZBTB45Q96K62 511 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CNDP2Q96KP4 475 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 HSFY1Q96LI6 401 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PEBP4Q96S96 227 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 NELL2Q99435 816 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 SORT1Q99523 831 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 EBF4Q9BQW3 602 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 SH2D3AQ9BRG2 576 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ORAI3Q9BRQ5 295 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MECRQ9BV79 373 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 SNRNP25Q9BV90 132 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 BOCQ9BWV1 1114 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MRPL1Q9BYD6 325 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 FAM126AQ9BYI3 521 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 YTHDF1Q9BYJ9 559 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CCDC68Q9H2F9 335 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZCCHC4Q9H5U6 513 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 EML4Q9HC35 981 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MAGEE1Q9HCI5 957 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 RRN3Q9NYV6 651 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 SAE1Q9UBE0 346 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 B4GALT6Q9UBX8 382 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MARCOQ9UEW3 520 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 RSL24D1Q9UHA3 163 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZNHIT2Q9UHR6 403 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 IPO11Q9UI26 975 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TLK1Q9UKI8 766 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 EMCNQ9ULC0 261 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 STAP1Q9ULZ2 295 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TMA7Q9Y2S6 64 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 HEY1Q9Y5J3 304 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 AP4B1Q9Y6B7 739 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CITO14578 2027 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF292O60281 2723 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 EPG5Q9HCE0 2579 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 A0A087WZ62 844 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PRSS51A0A1B0GVH4 220 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FAM170AA1A519 330 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 B4GALT3O60512 393 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PFDN1O60925 122 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TRMUO75648 421 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 RFPL2O75678 378 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 DDHD2O94830 711 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FBXO21O94952 628 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 BMP10O95393 424 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 GSRP00390 522 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 KNG1P01042 644 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 KRT19P08727 400 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FAM200BP0CF97 657 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SMIM18P0DKX4 95 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 KITP10721 976 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FCGR1AP12314 374 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 IDO1P14902 403 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 HOXA5P20719 270 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 IL4RP24394 825 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 HSD3B2P26439 372 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PIK3R1P27986 724 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 AOAHP28039 575 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 HTR7P34969 479 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PNPLA4P41247 253 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TNFSF9P41273 254 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 RPS9P46781 194 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 NUDT2P50583 147 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 ATP4BP51164 291 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PSMD7P51665 324 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TKTL1P51854 596 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 BCAT1P54687 386 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 RPL10AP62906 217 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 COG7P83436 770 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 BST2Q10589 180 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 DLG1Q12959 904 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TMED1Q13445 227 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 BMPR2Q13873 1038 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PRPSAP1Q14558 356 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 UBXN2BQ14CS0 331 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms