RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 H3BNH8 94 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 PRRG1O14668 218 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 LSM1O15116 133 aaKnown RBP12.71□□□□□ -0.37
SHMT2-205ENST00000553474 GREM1O60565 184 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 PFKLP17858 780 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 ERVPABLB-1P60509 514 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 UFM1P61960 85 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 ECT2LQ008S8 904 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 CREMQ03060 361 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 LIPEQ05469 1076 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 CAPRIN1Q14444 709 aaKnown RBP12.71□□□□□ -0.37
SHMT2-205ENST00000553474 TTLL9Q3SXZ7 439 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 SPOUT1Q5T280 376 aaKnown RBP12.71□□□□□ -0.37
SHMT2-205ENST00000553474 GRAMD4Q6IC98 578 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 NANOGP8Q6NSW7 305 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 LETMD1Q6P1Q0 360 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 IYDQ6PHW0 289 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 B3GNT6Q6ZMB0 384 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 MACC1Q6ZN28 852 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 LYSMD3Q7Z3D4 306 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 GOLGA7Q7Z5G4 137 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 SPRED1Q7Z699 444 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 AMIGO2Q86SJ2 522 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 SERPINA9Q86WD7 417 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 FAM9CQ8IZT9 166 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 GLB1L3Q8NCI6 653 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-205ENST00000553474 OR8J3Q8NGG0 315 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 OSCP1Q8WVF1 389 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 ISG20Q96AZ6 181 aaKnown RBP12.71□□□□□ -0.37
SHMT2-205ENST00000553474 DTNBP1Q96EV8 351 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 TMEM169Q96HH4 297 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 SLC29A1Q99808 456 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 CIPCQ9C0C6 399 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 ATP13A3Q9H7F0 1226 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 NANOGQ9H9S0 305 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 CLK4Q9HAZ1 481 aaKnown RBP12.71□□□□□ -0.37
SHMT2-205ENST00000553474 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
SHMT2-205ENST00000553474 ASIC5Q9NY37 505 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 ANAPC2Q9UJX6 822 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 RNF11Q9Y3C5 154 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 PCDHB3Q9Y5E6 796 aa12.71□□□□□ -0.37
SHMT2-205ENST00000553474 TCRBV5S2A0A599 114 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 ASPDHA6ND91 283 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 AGAP14A8MT82 685 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 GRXCR1A8MXD5 290 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 SLC28A1O00337 649 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 RGS14O43566 566 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 TLL1O43897 1013 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 RASAL1O95294 804 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 CAPN1P07384 714 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 MYF6P23409 242 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 ACRV1P26436 265 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 HMOX2P30519 316 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 CSKP41240 450 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 ATP6AP1Q15904 470 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 CYP51A1Q16850 503 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 PITRM1Q5JRX3 1037 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 PAGE3Q5JUK9 113 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 ZDHHC20Q5W0Z9 365 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 FAM109BQ6ICB4 259 aaPredicted RBP12.71□□□□□ -0.38
SHMT2-205ENST00000553474 IL27RAQ6UWB1 636 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 KIAA2013Q8IYS2 634 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 OR52B6Q8NGF0 335 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 DNAJB14Q8TBM8 379 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 ZNF558Q96NG5 402 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 NTMT1Q9BV86 223 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 ASB8Q9H765 288 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 SARS2Q9NP81 518 aaKnown RBP12.71□□□□□ -0.38
SHMT2-205ENST00000553474 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.71□□□□□ -0.38
SHMT2-205ENST00000553474 EGFL7Q9UHF1 273 aa12.71□□□□□ -0.38
SHMT2-205ENST00000553474 FCF1Q9Y324 198 aaKnown RBP12.71□□□□□ -0.38
SHMT2-205ENST00000553474 PIKFYVEQ9Y2I7 2098 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 A0A1W2PQ67 120 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 GAPDHSO14556 408 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-205ENST00000553474 OR7A17O14581 309 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 VILLO15195 856 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 IGSF6O95976 241 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 URODP06132 367 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 SERPINA4P29622 427 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 TRAF3Q13114 568 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 TMEM259Q4ZIN3 620 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 MPPE1Q53F39 396 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 RBM44Q6ZP01 1051 aaKnown RBP12.7□□□□□ -0.38
SHMT2-205ENST00000553474 MILR1Q7Z6M3 343 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 TMEM150AQ86TG1 271 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 METTL25Q8N6Q8 603 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 TRIML2Q8N7C3 387 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 OR4F6Q8NGB9 312 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 VPS33AQ96AX1 596 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 EID2BQ96D98 161 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 TEX37Q96LM6 180 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 ACOX2Q99424 681 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 SH3GL1Q99961 368 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 BDH2Q9BUT1 245 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 YTHDF1Q9BYJ9 559 aaKnown RBP12.7□□□□□ -0.38
SHMT2-205ENST00000553474 IPPKQ9H8X2 491 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 ABCB8Q9NUT2 735 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 OLAHQ9NV23 265 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 KIAA1522Q9P206 1035 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-205ENST00000553474 TRPS1Q9UHF7 1281 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms