RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-209ENST00000553280 CRKLP46109 303 aaKnown RBP4.89□□□□□ -1.63
SCFD1-209ENST00000553280 AMPHP49418 695 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 ASCL1P50553 236 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 ALDH3A2P51648 485 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 CD81P60033 236 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 PDE1BQ01064 536 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 PPATQ06203 517 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 TROAPQ12815 778 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 MORF4L2Q15014 288 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 ZNF674Q2M3X9 581 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 TWISTNBQ3B726 338 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-209ENST00000553280 PXDC1Q5TGL8 231 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 Q75L30 129 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 MEPCEQ7L2J0 689 aaKnown RBP4.89□□□□□ -1.63
SCFD1-209ENST00000553280 GLCCI1Q86VQ1 547 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 ZNF34Q8IZ26 560 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 ATAD1Q8NBU5 361 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 C9orf43Q8TAL5 461 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-209ENST00000553280 ZFAND2BQ8WV99 257 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 SLC44A1Q8WWI5 657 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 CCDC43Q96MW1 224 aaKnown RBP4.89□□□□□ -1.63
SCFD1-209ENST00000553280 MUS81Q96NY9 551 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 FOXP1Q9H334 677 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-209ENST00000553280 DPP3Q9NY33 737 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 RHCGQ9UBD6 479 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 CDH7Q9ULB5 785 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 FZD10Q9ULW2 581 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 KCNK7Q9Y2U2 307 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 KNSTRNQ9Y448 316 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 ZNF804BA4D1E1 1349 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 IGSF1Q8N6C5 1336 aa4.89□□□□□ -1.63
SCFD1-209ENST00000553280 A0A0U1RQJ8 604 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 DNAJC9-AS1A6NH13 148 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 DVL1O14640 695 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 OR10H2O60403 315 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 RFPL2O75678 378 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 TMEM191BP0C7N4 346 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 CYP11B2P19099 503 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 C21orf33P30042 268 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-209ENST00000553280 HNF4AP41235 474 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 SLC9A3P48764 834 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 PRKCZQ05513 592 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 EZH2Q15910 746 aaKnown RBP4.88□□□□□ -1.63
SCFD1-209ENST00000553280 SMU1Q2TAY7 513 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 ANKRD20A4Q4UJ75 823 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 ANKRD20A8PQ5CZ79 823 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 ANKRD20A2Q5SQ80 823 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 GCNT6Q5T4J0 391 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 ANKRD20A1Q5TYW2 823 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 ANKRD20A3Q5VUR7 823 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 RAPH1Q70E73 1250 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 TLK2Q86UE8 772 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 ZSCAN30Q86W11 494 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 MAP7D3Q8IWC1 876 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 TUSC5Q8IXB3 177 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 C1orf52Q8N6N3 182 aaKnown RBP4.88□□□□□ -1.63
SCFD1-209ENST00000553280 C10orf53Q8N6V4 93 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 NAT8LQ8N9F0 302 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-209ENST00000553280 WASF1Q92558 559 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 SFXN2Q96NB2 322 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 PCYT2Q99447 389 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 INPP5KQ9BT40 448 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 KATNB1Q9BVA0 655 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 SLC29A3Q9BZD2 475 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 SEMA6AQ9H2E6 1030 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 DPAGT1Q9H3H5 408 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 EBF3Q9H4W6 596 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 SLA2Q9H6Q3 261 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 TBC1D17Q9HA65 648 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 POT1Q9NUX5 634 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 C1RLQ9NZP8 487 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 RNF7Q9UBF6 113 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 GRIP1Q9Y3R0 1128 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 YIPF1Q9Y548 306 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 SNX9Q9Y5X1 595 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 PTGDR2Q9Y5Y4 395 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 PTPRCP08575 1304 aa4.88□□□□□ -1.63
SCFD1-209ENST00000553280 OOEPA6NGQ2 149 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 INO80B-WBP1J3KQ70 363 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 TNFRSF13BO14836 293 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-209ENST00000553280 SLC30A4O14863 429 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 ZNF263O14978 683 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 SERPINI2O75830 405 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 IGHV4-30-4P0DP06 118 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 SSTR2P30874 369 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 POLR2LP62875 67 aaKnown RBP4.87□□□□□ -1.63
SCFD1-209ENST00000553280 C17orf67Q0P5P2 114 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 Q0VFX4 171 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 OASLQ15646 514 aaKnown RBP4.87□□□□□ -1.63
SCFD1-209ENST00000553280 UGCGQ16739 394 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 TDRD12Q587J7 1177 aaKnown RBP4.87□□□□□ -1.63
SCFD1-209ENST00000553280 EFHC1Q5JVL4 640 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 GLRA4Q5JXX5 417 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 SHEQ5VZ18 495 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 PRR27Q6MZM9 219 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 C15orf39Q6ZRI6 1047 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 COLCA1Q6ZS62 124 aa4.87□□□□□ -1.63
SCFD1-209ENST00000553280 DSG4Q86SJ6 1040 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms