RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	NTRK1	P04629	796 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PYGM	P11217	842 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CTNNA2	P26232	953 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZNF75D	P51815	510 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	NAP1L1	P55209	391 aa	Known RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RPS18	P62269	152 aa	Known RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	IL11RA	Q14626	422 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	GPR19	Q15760	415 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LONRF2	Q1L5Z9	754 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PRAMEF17	Q5VTA0	474 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DENND5A	Q6IQ26	1287 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DARS2	Q6PI48	645 aa	Known RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PPP1R3B	Q86XI6	285 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TAB3	Q8N5C8	712 aa	Predicted RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SIDT2	Q8NBJ9	832 aa	Known RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ABHD17A	Q96GS6	310 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SLC41A2	Q96JW4	573 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DNAJC1	Q96KC8	554 aa	Known RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SPATA13	Q96N96	652 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TBL1Y	Q9BQ87	522 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RAB33B	Q9H082	229 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RBSN	Q9H1K0	784 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SLC24A2	Q9UI40	661 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CRLS1	Q9UJA2	301 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TP53TG5	Q9Y2B4	290 aa		11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.22	□□□□□ -0.61
TUBA1B-208	ENST00000552984	NAV2	Q8IVL1	2488 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ANKRD12	Q6UB98	2062 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	NUP210L	Q5VU65	1888 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MAST4	O15021	2626 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CDC14C	A4D256	554 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	OR6C74	A6NCV1	312 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	GOLGA6L3	A6NEY3	463 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TLCD2	A6NGC4	264 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	C2orf81	A6NN90	581 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DNAJB5	O75953	348 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SLC35G4	P0C7Q5	338 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TPH1	P17752	444 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PTPN7	P35236	360 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KPNA2	P52292	529 aa	Known RBP	11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	GDF10	P55107	478 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	COPS2	P61201	443 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DNASE1L3	Q13609	305 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	IGFBP7	Q16270	282 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	BCL7A	Q4VC05	210 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	NXPE1	Q8N323	547 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LRRC57	Q8N9N7	239 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	OR2L2	Q8NH16	312 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	APOBEC4	Q8WW27	367 aa	Known RBP	11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	UBXN4	Q92575	508 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	EFHD1	Q9BUP0	239 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LHX9	Q9NQ69	397 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FGF21	Q9NSA1	209 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	HRASLS2	Q9NWW9	162 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SEMA5B	Q9P283	1151 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TUBD1	Q9UJT1	453 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RARRES3	Q9UL19	164 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KCNMB2	Q9Y691	235 aa		11.21	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SHANK1	Q9Y566	2161 aa		11.21	□□□□□ -0.62
TUBA1B-208	ENST00000552984	LRRK2	Q5S007	2527 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	TCRBV7S2A1N4T	A0A589	114 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	UBA6	A0AVT1	1052 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	C5orf60	A6NFR6	353 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	AGAP14	A8MT82	685 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	ARHGAP6	O43182	974 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	LDB2	O43679	373 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	KCNJ13	O60928	360 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	METTL18	O95568	372 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	FTCD	O95954	541 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	PDGFA	P04085	211 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	POLR2C	P19387	275 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	MC4R	P32245	332 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	PRLHR	P49683	370 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	RWDD2B	P57060	319 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	MC1R	Q01726	317 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	PRPSAP1	Q14558	356 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	FAM69B	Q5VUD6	431 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	OOSP2	Q86WS3	158 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	CFAP206	Q8IYR0	622 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	FAM71D	Q8N9W8	422 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	ZNF514	Q96K75	400 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	PANX2	Q96RD6	677 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	DESI2	Q9BSY9	194 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	TLR10	Q9BXR5	811 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	TRIM55	Q9BYV6	548 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	TWSG1	Q9GZX9	223 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	KLHL25	Q9H0H3	589 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	ACTL8	Q9H568	366 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	KIR3DX1	Q9H7L2	352 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	PDE7B	Q9NP56	450 aa		11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	LUC7L	Q9NQ29	371 aa	Known RBP	11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	AAR2	Q9Y312	384 aa	Known RBP	11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1B-208	ENST00000552984	PIPSL	A2A3N6	862 aa		11.19	□□□□□ -0.62
TUBA1B-208	ENST00000552984	CCDC66	A2RUB6	948 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms