RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 PTGDR2Q9Y5Y4 395 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 CR2P20023 1033 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 ARNTP27540 789 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 STX1BP61266 288 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 DAB2P98082 770 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 SMAD2Q15796 467 aaKnown RBP8.04□□□□□ -1.12
CHPT1-208ENST00000552215 ARL13AQ5H913 290 aaPredicted RBP8.04□□□□□ -1.12
CHPT1-208ENST00000552215 RTL10Q7L3V2 364 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 DOK4Q8TEW6 326 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 HIC2Q96JB3 615 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 SLC6A18Q96N87 628 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 GATA5Q9BWX5 397 aaPredicted RBP8.04□□□□□ -1.12
CHPT1-208ENST00000552215 CEP44Q9C0F1 390 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 V9GYQ6 96 aa8.04□□□□□ -1.12
CHPT1-208ENST00000552215 MYOCOSA0A1B0GUC4 107 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 FADS2P1A8MWK0 482 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 E7ESA3 106 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ADAM23O75077 832 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 RFPL1O75677 317 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ANXA5P08758 320 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 SLC2A4P14672 509 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 JUNDP17535 347 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ITGB7P26010 798 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 CYP4F3Q08477 520 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 AFMIDQ63HM1 303 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 MTDHQ86UE4 582 aaKnown RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 HORMAD1Q86X24 394 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 TRIM42Q8IWZ5 723 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 FRS2Q8WU20 508 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 LCN9Q8WX39 176 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 TFGQ92734 400 aaPredicted RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 AARSD1Q9BTE6 412 aaKnown RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ZSCAN5AQ9BUG6 496 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 TMEM168Q9H0V1 697 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 R4GN57 208 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 GNG14A0A1W2PPG7 69 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ABCB1P08183 1280 aaPredicted RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 GABRG2P18507 467 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 CTC1Q2NKJ3 1217 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 CERS6Q6ZMG9 384 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 SLC44A2Q8IWA5 706 aaPredicted RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 RELTQ969Z4 430 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 TUBGCP5Q96RT8 1024 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 WWP1Q9H0M0 922 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 PLIN3O60664 434 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ZNF821O75541 412 aaPredicted RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ESR1P03372 595 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 PFKLP17858 780 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ZNF140P52738 457 aaPredicted RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 TCHHL1Q5QJ38 904 aaPredicted RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 FAM180BQ6P0A1 224 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 VRK3Q8IV63 474 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 MIER2Q8N344 545 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 NKAPQ8N5F7 415 aaKnown RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 RASGEF1AQ8N9B8 481 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 C2CD4AQ8NCU7 369 aaPredicted RBP8.03□□□□□ -1.12
CHPT1-208ENST00000552215 BTN2A2Q8WVV5 523 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 LRRC37BQ96QE4 947 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 MIPEPQ99797 713 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 IL21RQ9HBE5 538 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 CD248Q9HCU0 757 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 LTB4R2Q9NPC1 389 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 CD320Q9NPF0 282 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 ZFP69BQ9UJL9 534 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 FADS3Q9Y5Q0 445 aa8.03□□□□□ -1.12
CHPT1-208ENST00000552215 OR4F21O95013 312 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 SLC35E2BP0CK96 405 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 ACRV1P26436 265 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 PHKG1Q16816 387 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 FBXO43Q4G163 708 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 ACAD11Q709F0 780 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 LRRTM4Q86VH4 590 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 SFTPA2Q8IWL1 248 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 INPP5DQ92835 1189 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 BIRC7Q96CA5 298 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 SLC45A3Q96JT2 553 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 FAM86C1Q9NVL1 165 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 KCTD5Q9NXV2 234 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 COPG2Q9UBF2 871 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 STARD13Q9Y3M8 1113 aa8.02□□□□□ -1.12
CHPT1-208ENST00000552215 OAS3Q9Y6K5 1087 aaKnown RBP8.02□□□□□ -1.12
CHPT1-208ENST00000552215 ACACAQ13085 2346 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 RGSL1A5PLK6 1076 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 DLX3O60479 287 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ESRRAP11474 423 aaPredicted RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 CNTFP26441 200 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 GCAP28676 217 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ADPRHP54922 357 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 SESN3P58005 492 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ZNF549Q6P9A3 640 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 C10orf67Q8IYJ2 551 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ZNF781Q8N8C0 355 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 BANPQ8N9N5 519 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 OR13H1Q8NG92 308 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 PDXPQ96GD0 296 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 SEC16BQ96JE7 1060 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 CCDC3Q9BQI4 270 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 TMEM120AQ9BXJ8 343 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 EPN3Q9H201 632 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 IPPKQ9H8X2 491 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms