RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PRMT9Q6P2P2 845 aa13.78□□□□□ -0.2
RAB3IP-216ENST00000552199 MILR1Q7Z6M3 343 aa13.78□□□□□ -0.2
RAB3IP-216ENST00000552199 TMEM79Q9BSE2 394 aa13.78□□□□□ -0.2
RAB3IP-216ENST00000552199 WWOXQ9NZC7 414 aa13.78□□□□□ -0.2
RAB3IP-216ENST00000552199 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
RAB3IP-216ENST00000552199 MRPS23Q9Y3D9 190 aaKnown RBP13.78□□□□□ -0.2
RAB3IP-216ENST00000552199 TSPAN11A1L157 253 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 C9JVG2 144 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 EIF3FO00303 357 aaPredicted RBP13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 SYNCRIPO60506 623 aaKnown RBP13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 KATNA1O75449 491 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 POU2F2P09086 479 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 CISD3P0C7P0 127 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 TIMP2P16035 220 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 AOAHP28039 575 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 HTR6P50406 440 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 SLC7A2P52569 658 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 ATP6AP1LQ52LC2 224 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 OGFRL1Q5TC84 451 aaPredicted RBP13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 IL27RAQ6UWB1 636 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 SPATA24Q86W54 205 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 SFRP1Q8N474 314 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 MINDY1Q8N5J2 469 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 CELF5Q8N6W0 485 aaKnown RBP13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 ITFG1Q8TB96 612 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 SPDL1Q96EA4 605 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 LRRC3BQ96PB8 259 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 SLC39A3Q9BRY0 314 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 SPATA16Q9BXB7 569 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 PCDHAC1Q9H158 963 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 GID8Q9NWU2 228 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 OPTCQ9UBM4 332 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 CD84Q9UIB8 345 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 SLC8A2Q9UPR5 921 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 ANGPTL3Q9Y5C1 460 aa13.77□□□□□ -0.21
RAB3IP-216ENST00000552199 PRSS51A0A1B0GVH4 220 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 A0A1W2PP18 115 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 SLC22A3O75751 556 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 SYN1P17600 705 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 EN2P19622 333 aaPredicted RBP13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 WEE1P30291 646 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 GDF5P43026 501 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 ZFP36L2P47974 494 aaKnown RBP13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 UFM1P61960 85 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 GBX1Q14549 363 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 SFT2D3Q587I9 215 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 CDKL4Q5MAI5 379 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 HSD11B1LQ7Z5J1 315 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 TMEM126BQ8IUX1 230 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 FNDC5Q8NAU1 212 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 TEX37Q96LM6 180 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 C1orf50Q9BV19 199 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 FAM83DQ9H4H8 585 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 IL1RL2Q9HB29 575 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 PCDH12Q9NPG4 1184 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 TMEM45AQ9NWC5 275 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 SMOXQ9NWM0 555 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 DUS2Q9NX74 493 aaKnown RBP13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 ZIM2Q9NZV7 527 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 IL36AQ9UHA7 158 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 DPP7Q9UHL4 492 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 UPK3BL1B0FP48 263 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 UPK3BL2E5RIL1 263 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 K7EPI3 171 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 ASLP04424 464 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 CYP17A1P05093 508 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 C8BP07358 591 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 CTSLP07711 333 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 SRPRAP08240 638 aaKnown RBP13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 ATP1B2P14415 290 aaPredicted RBP13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 MYOGP15173 224 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 HMOX2P30519 316 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 LBX1P52954 281 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 KCNK10P57789 538 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 DCDC1P59894 354 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 MRPS35P82673 323 aaKnown RBP13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 EMX2Q04743 252 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 RCAN2Q14206 197 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 ADGRE1Q14246 886 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 UCMAQ8WVF2 138 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 PPP2R3CQ969Q6 453 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 SLC45A3Q96JT2 553 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 LRGUKQ96M69 825 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 MTG2Q9H4K7 406 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 HEBP1Q9NRV9 189 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 ABCD2Q9UBJ2 740 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 MBD1Q9UIS9 605 aaPredicted RBP13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 RIMS3Q9UJD0 308 aa13.76□□□□□ -0.21
RAB3IP-216ENST00000552199 NUP210Q8TEM1 1887 aaPredicted RBP13.75□□□□□ -0.21
RAB3IP-216ENST00000552199 PLXNA2O75051 1894 aa13.75□□□□□ -0.21
RAB3IP-216ENST00000552199 FXYD1O00168 92 aa13.75□□□□□ -0.21
RAB3IP-216ENST00000552199 LSM1O15116 133 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-216ENST00000552199 ANXA5P08758 320 aa13.75□□□□□ -0.21
RAB3IP-216ENST00000552199 ADH5P11766 374 aa13.75□□□□□ -0.21
RAB3IP-216ENST00000552199 NFKBIAP25963 317 aa13.75□□□□□ -0.21
RAB3IP-216ENST00000552199 DGKGP49619 791 aa13.75□□□□□ -0.21
RAB3IP-216ENST00000552199 POLR2JP52435 117 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms