RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 VWA1Q6PCB0 445 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 SERPINA13PQ6UXR4 307 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 DCDC5Q6ZRR9 648 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 PIP4P1Q86T03 277 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 WDR5BQ86VZ2 330 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 UEVLDQ8IX04 471 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 LAS2Q8IYD9 372 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 ADGRF3Q8IZF5 1079 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 OR8H3Q8N146 312 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 SPEM1Q8N4L4 309 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 ARL10Q8N8L6 244 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 SYT2Q8N9I0 419 aaPredicted RBP3.83□□□□□ -1.8
LIMA1-208ENST00000551691 CMASQ8NFW8 434 aaPredicted RBP3.83□□□□□ -1.8
LIMA1-208ENST00000551691 C2CD4CQ8TF44 421 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 SLC25A43Q8WUT9 341 aaPredicted RBP3.83□□□□□ -1.8
LIMA1-208ENST00000551691 TFAP2BQ92481 460 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 SNX18Q96RF0 628 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 CIPCQ9C0C6 399 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 NDST4Q9H3R1 872 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 VAT1LQ9HCJ6 419 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 DUSP22Q9NRW4 184 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 ABCF3Q9NUQ8 709 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.83□□□□□ -1.8
LIMA1-208ENST00000551691 KCTD5Q9NXV2 234 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 DKK3Q9UBP4 350 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 GTF3C4Q9UKN8 822 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 CDH7Q9ULB5 785 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 MAFFQ9ULX9 164 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 NENFQ9UMX5 172 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 FAM96BQ9Y3D0 163 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 PTRH2Q9Y3E5 179 aaKnown RBP3.83□□□□□ -1.8
LIMA1-208ENST00000551691 PKP3Q9Y446 797 aa3.83□□□□□ -1.8
LIMA1-208ENST00000551691 SPENQ96T58 3664 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 GON4LQ3T8J9 2241 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 SPAG17Q6Q759 2223 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 LOC100509620A0A075B734 347 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 A0A087WV48 116 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 GSTTP1A0A1W2PQM5 241 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 ARHGEF37A1IGU5 675 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 BCLAF3A2AJT9 711 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 FAM149AA5PLN7 773 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 TMEM191CA6NGB0 347 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 GLOD5A6NK44 160 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 MARCH11A6NNE9 402 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 BTBD18B2RXH4 712 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CLIC1O00299 241 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 LDLRAD4O15165 306 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CCL16O15467 120 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 ADAM20O43506 726 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 SLC28A2O43868 658 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 PAGE4O60829 102 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 ATP9AO75110 1047 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 GPC4O75487 556 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CSDE1O75534 798 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 DDHD2O94830 711 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 SEC31AO94979 1220 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 SPDEFO95238 335 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 KAT7O95251 611 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 PGM3O95394 542 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 NFATC1O95644 943 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 ADAP00813 363 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 PTMAP06454 111 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 SRPRAP08240 638 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CCDC175P0C221 793 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 HSPD1P10809 573 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 FCGR2AP12318 317 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 FPR3P25089 353 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 TYK2P29597 1187 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 ATP5DP30049 168 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 TCF7P36402 384 aaPredicted RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CLK3P49761 638 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 GALCP54803 685 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 F2RL1P55085 397 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CYP4A11Q02928 519 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CEBPZQ03701 1054 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CAMK2DQ13557 499 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 TP53BP2Q13625 1128 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 PGM5Q15124 567 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 PTPRRQ15256 657 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 NAB2Q15742 525 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 C15orf59Q2T9L4 293 aaPredicted RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 C5orf22Q49AR2 442 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 NUGGCQ68CJ6 796 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 NAPEPLDQ6IQ20 393 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 ANKRD16Q6P6B7 361 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 KCNV1Q6PIU1 500 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 RANBP10Q6VN20 620 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 SLC29A4Q7RTT9 530 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 PRSS45Q7RTY3 260 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CCDC186Q7Z3E2 898 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 AACSQ86V21 672 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 FAM228AQ86W67 206 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 ECHDC2Q86YB7 292 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 SCML4Q8N228 414 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 LRRC43Q8N309 656 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 SETD6Q8TBK2 473 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 HAS1Q92839 578 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 CTHRC1Q96CG8 243 aa3.82□□□□□ -1.8
LIMA1-208ENST00000551691 ZC3HAV1LQ96H79 300 aaKnown RBP3.82□□□□□ -1.8
LIMA1-208ENST00000551691 HIC2Q96JB3 615 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms