RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 FDCSPQ8NFU4 85 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 RNF25Q96BH1 459 aaPredicted RBP16.06■□□□□ 0.16
SSH1-208ENST00000548522 TTC25Q96NG3 672 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 PANX2Q96RD6 677 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 INSM2Q96T92 566 aaPredicted RBP16.06■□□□□ 0.16
SSH1-208ENST00000548522 NRTNQ99748 197 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 NUDT9Q9BW91 350 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 WWP1Q9H0M0 922 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 IL17CQ9P0M4 197 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.06■□□□□ 0.16
SSH1-208ENST00000548522 LRBAP50851 2863 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 MED13Q9UHV7 2174 aa16.06■□□□□ 0.16
SSH1-208ENST00000548522 HIVEP3Q5T1R4 2406 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 OR6C74A6NCV1 312 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 ZNF487B1APH4 448 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 PECAM1P16284 738 aaPredicted RBP16.05■□□□□ 0.16
SSH1-208ENST00000548522 NFKB1P19838 968 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 COL8A1P27658 744 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 ITGA1P56199 1179 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 WASHC5Q12768 1159 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 XRCC4Q13426 336 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 RAPSNQ13702 412 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 PRKD1Q15139 912 aaPredicted RBP16.05■□□□□ 0.16
SSH1-208ENST00000548522 PPP2R5EQ16537 467 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 EIF2S3LQ2VIR3 472 aaKnown RBP16.05■□□□□ 0.16
SSH1-208ENST00000548522 TEX44Q53QW1 395 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 IZUMO3Q5VZ72 239 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 JMJD6Q6NYC1 403 aaPredicted RBP16.05■□□□□ 0.16
SSH1-208ENST00000548522 KLHL35Q6PF15 583 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 FAM198BQ6UWH4 519 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 KMT5CQ86Y97 462 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 RHOT1Q8IXI2 618 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 LILRA3Q8N6C8 439 aaPredicted RBP16.05■□□□□ 0.16
SSH1-208ENST00000548522 BLOC1S5Q8TDH9 187 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 SEC14L1Q92503 715 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 OXNAD1Q96HP4 312 aaPredicted RBP16.05■□□□□ 0.16
SSH1-208ENST00000548522 TEKT5Q96M29 485 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 CD180Q99467 661 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 CASS4Q9NQ75 786 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 SOHLH2Q9NX45 425 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 LUC7L2Q9Y383 392 aaKnown RBP16.05■□□□□ 0.16
SSH1-208ENST00000548522 HYOU1Q9Y4L1 999 aa16.05■□□□□ 0.16
SSH1-208ENST00000548522 GLYATL1P3A0A0U1RQE8 302 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 LOC285095A0A1B0GVY8 99 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 GOLGA6L9A6NEM1 432 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 A6NL46 340 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 CEACAM4O75871 244 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 ZBTB11O95625 1053 aaPredicted RBP16.04■□□□□ 0.16
SSH1-208ENST00000548522 TPM1P09493 284 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 LPOP22079 712 aaPredicted RBP16.04■□□□□ 0.16
SSH1-208ENST00000548522 PDE1BQ01064 536 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 ZNF789Q5FWF6 425 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 LDLRAP1Q5SW96 308 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 PLEKHS1Q5SXH7 462 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 METRNLQ641Q3 311 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 SLC6A19Q695T7 634 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 CCDC70Q6NSX1 233 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 BPHLQ86WA6 291 aaPredicted RBP16.04■□□□□ 0.16
SSH1-208ENST00000548522 OOSP2Q86WS3 158 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 CNGA4Q8IV77 575 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 RBMXL3Q8N7X1 1067 aaKnown RBP16.04■□□□□ 0.16
SSH1-208ENST00000548522 BRSK1Q8TDC3 778 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 MRGPRX2Q96LB1 330 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 RMDN2Q96LZ7 410 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 C12orf66Q96MD2 445 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 ZCCHC2Q9C0B9 1178 aaKnown RBP16.04■□□□□ 0.16
SSH1-208ENST00000548522 SLC24A2Q9UI40 661 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 SNX7Q9UNH6 387 aa16.04■□□□□ 0.16
SSH1-208ENST00000548522 SLC9B1P1A6NJY1 282 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 MEN1O00255 615 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 ZNF185O15231 689 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 KRT86O43790 486 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 KCNJ13O60928 360 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 TMEM63AO94886 807 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 CAPN1P07384 714 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 TNNT1P13805 278 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 POLR2CP19387 275 aaPredicted RBP16.03■□□□□ 0.16
SSH1-208ENST00000548522 AKT1P31749 480 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 RORAP35398 523 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 ADCY2Q08462 1091 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 SLC18A3Q16572 532 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 ASTE1Q2TB18 679 aaPredicted RBP16.03■□□□□ 0.16
SSH1-208ENST00000548522 PTCHD3Q3KNS1 767 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 ZNF787Q6DD87 383 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 MFSD7Q6UXD7 560 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 MICALCLQ6ZW33 695 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 GLT6D1Q7Z4J2 308 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 DAAM2Q86T65 1068 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 DSELQ8IZU8 1212 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 IPMKQ8NFU5 416 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 OR1L3Q8NH93 324 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 SLC35G2Q8TBE7 412 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 C19orf60Q96EN9 201 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 MAK16Q9BXY0 300 aaKnown RBP16.03■□□□□ 0.16
SSH1-208ENST00000548522 KIR3DX1Q9H7L2 352 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 PCMTD2Q9NV79 361 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 MAP10Q9P2G4 905 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 FAM153AQ9UHL3 310 aa16.03■□□□□ 0.16
SSH1-208ENST00000548522 TCFL5Q9UL49 500 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms