RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 FAM71DQ8N9W8 422 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 LINC00615Q96LM1 132 aaPredicted RBP13.03□□□□□ -0.32
CPSF6-204ENST00000547486 C12orf66Q96MD2 445 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 PPM1MQ96MI6 270 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 NRTNQ99748 197 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 FERMT1Q9BQL6 677 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 CLMPQ9H6B4 373 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 HRASLS2Q9NWW9 162 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 SLC24A2Q9UI40 661 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 ACSL5Q9ULC5 683 aa13.03□□□□□ -0.32
CPSF6-204ENST00000547486 R3HDM2Q9Y2K5 976 aaKnown RBP13.03□□□□□ -0.32
CPSF6-204ENST00000547486 TCRBV7S2A1N4TA0A589 114 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 OR5K3A6NET4 321 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 DDX3YO15523 660 aaKnown RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 STK10O94804 968 aaKnown RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 IPO7O95373 1038 aaKnown RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 EBLN1P0CF75 366 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 GDF10P55107 478 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 PLCL1Q15111 1095 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 PARP6Q2NL67 630 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 ZNF658BQ4V348 819 aaPredicted RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 CRTC2Q53ET0 693 aaPredicted RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 FBXO38Q6PIJ6 1188 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 SNX20Q7Z614 316 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 TMEM135Q86UB9 458 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 NXPE1Q8N323 547 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 SIDT2Q8NBJ9 832 aaKnown RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 ZFPM2Q8WW38 1151 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 UBXN4Q92575 508 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 STAMBPL1Q96FJ0 436 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 DNAJC1Q96KC8 554 aaKnown RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 RMDN2Q96LZ7 410 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 KIR3DX1Q9H7L2 352 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 ZNF71Q9NQZ8 489 aaPredicted RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 LNPEPQ9UIQ6 1025 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 CRLS1Q9UJA2 301 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 TUBD1Q9UJT1 453 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 PADI1Q9ULC6 663 aa13.02□□□□□ -0.33
CPSF6-204ENST00000547486 ASH1LQ9NR48 2969 aaKnown RBP13.02□□□□□ -0.33
CPSF6-204ENST00000547486 OR6C74A6NCV1 312 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 KATNA1O75449 491 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 FTCDO95954 541 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 NTRK1P04629 796 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 ATP1B2P14415 290 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-204ENST00000547486 CETN2P41208 172 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 ARCN1P48444 511 aaKnown RBP13.01□□□□□ -0.33
CPSF6-204ENST00000547486 PRLHRP49683 370 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 CSRP3P50461 194 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 PDE1BQ01064 536 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 MC1RQ01726 317 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 KLF1Q13351 362 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-204ENST00000547486 TUBB3Q13509 450 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 ERV3-1Q14264 604 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 GSE1Q14687 1217 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 DNTTIP2Q5QJE6 756 aaKnown RBP13.01□□□□□ -0.33
CPSF6-204ENST00000547486 FAM199XQ6PEV8 388 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-204ENST00000547486 KLHL35Q6PF15 583 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 PEX26Q7Z412 305 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 D2HGDHQ8N465 521 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 OR4E2Q8NGC2 313 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 APOBEC4Q8WW27 367 aaKnown RBP13.01□□□□□ -0.33
CPSF6-204ENST00000547486 DCUN1D1Q96GG9 259 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 ABHD17AQ96GS6 310 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 RUFY1Q96T51 708 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 COPS8Q99627 209 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 BAG1Q99933 345 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-204ENST00000547486 C19orf43Q9BQ61 176 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 DESI2Q9BSY9 194 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 PDE7BQ9NP56 450 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 LHX9Q9NQ69 397 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 PIH1D1Q9NWS0 290 aaKnown RBP13.01□□□□□ -0.33
CPSF6-204ENST00000547486 AMFRQ9UKV5 643 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 KCNMB2Q9Y691 235 aa13.01□□□□□ -0.33
CPSF6-204ENST00000547486 IGLV3-16A0A075B6K0 115 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 TRBV5-4A0A0C4DH59 114 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 UBA6A0AVT1 1052 aaPredicted RBP13□□□□□ -0.33
CPSF6-204ENST00000547486 KLHL33A6NCF5 533 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 TLCD2A6NGC4 264 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 K7EM74 188 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 SLC35G4P0C7Q5 338 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 CCNYL3P0C7X3 344 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 POLR2CP19387 275 aaPredicted RBP13□□□□□ -0.33
CPSF6-204ENST00000547486 ITGALP20701 1170 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 MC4RP32245 332 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 HADHAP40939 763 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 KPNA2P52292 529 aaKnown RBP13□□□□□ -0.33
CPSF6-204ENST00000547486 HSD11B2P80365 405 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 GPR19Q15760 415 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 SKIDA1Q1XH10 827 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 GPR33Q49SQ1 333 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 KIAA1328Q86T90 577 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 OOSP2Q86WS3 158 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 PIANPQ8IYJ0 282 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 TAB3Q8N5C8 712 aaPredicted RBP13□□□□□ -0.33
CPSF6-204ENST00000547486 CLDN19Q8N6F1 224 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 SLC38A9Q8NBW4 561 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 PHC3Q8NDX5 983 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 SLC35B2Q8TB61 432 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 CT55Q8WUE5 264 aa13□□□□□ -0.33
CPSF6-204ENST00000547486 ULK4Q96C45 1275 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms