RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 XRCC1P18887 633 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 AOAHP28039 575 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 ECHS1P30084 290 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 SKIV2L2P42285 1042 aaKnown RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 CD151P48509 253 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 MPP1Q00013 466 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 E2F1Q01094 437 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 HSPA14Q0VDF9 509 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 BOP1Q14137 746 aaKnown RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 KRT33BQ14525 404 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 BRD3Q15059 726 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 ZNF789Q5FWF6 425 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 PLEKHS1Q5SXH7 462 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 CNSTQ6PJW8 725 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 CCNI2Q6ZMN8 369 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 FAM83HQ6ZRV2 1179 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 TRMT10CQ7L0Y3 403 aaKnown RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 STRA8Q7Z7C7 330 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 C17orf82Q86X59 251 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 CTAGE3PQ8IX95 158 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 KYQ8NBH2 561 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 FBF1Q8TES7 1133 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-213ENST00000546820 WWP1Q9H0M0 922 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 ABCG4Q9H172 646 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 LATS2Q9NRM7 1088 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 KLHL42Q9P2K6 505 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 PSMD13Q9UNM6 376 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 PCDHGA1Q9Y5H4 931 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 COLEC10Q9Y6Z7 277 aa13.49□□□□□ -0.25
PTCH1-213ENST00000546820 ARHGEF17Q96PE2 2063 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-213ENST00000546820 SLC5A10A0PJK1 596 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 A6NCN8 305 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 FAM159BA6NKW6 160 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 IQCF5A8MTL0 148 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 VPS26AO75436 327 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 EML2O95834 649 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 NDUFS1P28331 727 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 CCR7P32248 378 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 GPR3P46089 330 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 FASLGP48023 281 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 MAZP56270 477 aaKnown RBP13.48□□□□□ -0.25
PTCH1-213ENST00000546820 HHEXQ03014 270 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 DNAJC3Q13217 504 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 NAB1Q13506 487 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 TTLL9Q3SXZ7 439 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 CTSL3PQ5NE16 218 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 EFL1Q7Z2Z2 1120 aaKnown RBP13.48□□□□□ -0.25
PTCH1-213ENST00000546820 RBM12BQ8IXT5 1001 aaKnown RBP13.48□□□□□ -0.25
PTCH1-213ENST00000546820 KRT222Q8N1A0 295 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 IFI44Q8TCB0 444 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 SLC37A2Q8TED4 501 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 ZFPM2Q8WW38 1151 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 KCNJ9Q92806 393 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 C12orf66Q96MD2 445 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 CYTH2Q99418 400 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 CPNE1Q99829 537 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 AARSD1Q9BTE6 412 aaKnown RBP13.48□□□□□ -0.25
PTCH1-213ENST00000546820 CDC42EP4Q9H3Q1 356 aaKnown RBP13.48□□□□□ -0.25
PTCH1-213ENST00000546820 ANKZF1Q9H8Y5 726 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 SARS2Q9NP81 518 aaKnown RBP13.48□□□□□ -0.25
PTCH1-213ENST00000546820 POT1Q9NUX5 634 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 TAS2R13Q9NYV9 303 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 NINJ2Q9NZG7 142 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 CPNE7Q9UBL6 633 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 ZFC3H1O60293 1989 aaKnown RBP13.48□□□□□ -0.25
PTCH1-213ENST00000546820 PIKFYVEQ9Y2I7 2098 aa13.48□□□□□ -0.25
PTCH1-213ENST00000546820 LY6G6EA0A0G2JKS1 128 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 SPAARA0A1B0GVQ0 90 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 GIPC1O14908 333 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 NIPSNAP2O75323 286 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 RFPL3O75679 317 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 SLCO2B1O94956 709 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 MYF5P13349 255 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 BRAFP15056 766 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 SLC19A1P41440 591 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 PMS2P54278 862 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 CLCA4Q14CN2 919 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 RPE65Q16518 533 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 KBTBD12Q3ZCT8 623 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 ZNF658BQ4V348 819 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-213ENST00000546820 CCDC157Q569K6 752 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 GRTP1Q5TC63 336 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 CAPRIN2Q6IMN6 1127 aaKnown RBP13.47□□□□□ -0.25
PTCH1-213ENST00000546820 WDR93Q6P2C0 686 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 GUSBP11Q6P575 273 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 ZNF549Q6P9A3 640 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 PPM1NQ8N819 430 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 WDR48Q8TAF3 677 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 PATE1Q8WXA2 126 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 TFGQ92734 400 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-213ENST00000546820 INPP5DQ92835 1189 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 SLC38A3Q99624 504 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 OR52A5Q9H2C5 316 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 IMP3Q9NV31 184 aaKnown RBP13.47□□□□□ -0.25
PTCH1-213ENST00000546820 SCHIP1Q9P0W5 487 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-213ENST00000546820 WDR37Q9Y2I8 494 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 VWA7Q9Y334 891 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 DHRS7Q9Y394 339 aa13.47□□□□□ -0.25
PTCH1-213ENST00000546820 RNF215Q9Y6U7 377 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms