RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 OLIG1Q8TAK6 271 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 MRGPRDQ8TDS7 321 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 GIMAP5Q96F15 307 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 GAD1Q99259 594 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 SYT11Q9BT88 431 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 SLA2Q9H6Q3 261 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 MIOSQ9NXC5 875 aa3.64□□□□□ -1.83
CCDC38-204ENST00000546816 EXOGQ9Y2C4 368 aaKnown RBP3.64□□□□□ -1.83
CCDC38-204ENST00000546816 IGHV4-61A0A0C4DH41 118 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 LIPT2A6NK58 231 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 DCXO43602 365 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 TRMUO75648 421 aaKnown RBP3.63□□□□□ -1.83
CCDC38-204ENST00000546816 AP2A2O94973 939 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 CCNDBP1O95273 360 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 IGHV4-59P01825 116 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 HMBSP08397 361 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 ACP2P11117 423 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 CEBPBP17676 345 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 PSMA4P25789 261 aaKnown RBP3.63□□□□□ -1.83
CCDC38-204ENST00000546816 CDH11P55287 796 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 MRPS5P82675 430 aaKnown RBP3.63□□□□□ -1.83
CCDC38-204ENST00000546816 P2RY6Q15077 328 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 RARS2Q5T160 578 aaKnown RBP3.63□□□□□ -1.83
CCDC38-204ENST00000546816 ACSM2BQ68CK6 577 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 PWWP2BQ6NUJ5 590 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 CPLX4Q7Z7G2 160 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 PCYOX1LQ8NBM8 494 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 TMEM143Q96AN5 459 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 ZNF582Q96NG8 517 aaPredicted RBP3.63□□□□□ -1.83
CCDC38-204ENST00000546816 NUDCD1Q96RS6 583 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 PLCXD1Q9NUJ7 323 aa3.63□□□□□ -1.83
CCDC38-204ENST00000546816 A0A087WW49 117 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 SLCO1B7G3V0H7 640 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 GPC4O75487 556 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 RAF1P04049 648 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 HSPA1AP0DMV8 641 aaKnown RBP3.62□□□□□ -1.83
CCDC38-204ENST00000546816 HSPA1BP0DMV9 641 aaKnown RBP3.62□□□□□ -1.83
CCDC38-204ENST00000546816 CDH2P19022 906 aaPredicted RBP3.62□□□□□ -1.83
CCDC38-204ENST00000546816 NFKBIAP25963 317 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 NKX2-1P43699 371 aaPredicted RBP3.62□□□□□ -1.83
CCDC38-204ENST00000546816 SP3Q02447 781 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 GKAP1Q5VSY0 366 aaPredicted RBP3.62□□□□□ -1.83
CCDC38-204ENST00000546816 KLC3Q6P597 504 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 ZNF613Q6PF04 617 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 TMTC3Q6ZXV5 915 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 SLC16A9Q7RTY1 509 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 ANKRD52Q8NB46 1076 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 GRHL3Q8TE85 626 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 RBM4BQ9BQ04 359 aaKnown RBP3.62□□□□□ -1.83
CCDC38-204ENST00000546816 CABLES2Q9BTV7 478 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 HGH1Q9BTY7 390 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 MCRIP2Q9BUT9 160 aaKnown RBP3.62□□□□□ -1.83
CCDC38-204ENST00000546816 CCDC177Q9NQR7 707 aaPredicted RBP3.62□□□□□ -1.83
CCDC38-204ENST00000546816 OLFML3Q9NRN5 406 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 PAG1Q9NWQ8 432 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 SLC7A7Q9UM01 511 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 GTF2A1LQ9UNN4 478 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 MTMR6Q9Y217 621 aa3.62□□□□□ -1.83
CCDC38-204ENST00000546816 PLEKHD1A6NEE1 506 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 E9PQ18 207 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 DNM1LO00429 736 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 ZNF197O14709 1029 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 EDN1P05305 212 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 H1F0P07305 194 aaKnown RBP3.61□□□□□ -1.83
CCDC38-204ENST00000546816 ACTN1P12814 892 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 RARGP13631 454 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 TMEM11P17152 192 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 TYMPP19971 482 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 PPP2R2BQ00005 443 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 LGALS3BPQ08380 585 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 G3BP1Q13283 466 aaKnown RBP eCLIP3.61□□□□□ -1.83
CCDC38-204ENST00000546816 ASTE1Q2TB18 679 aaPredicted RBP3.61□□□□□ -1.83
CCDC38-204ENST00000546816 CTU2Q2VPK5 515 aaKnown RBP3.61□□□□□ -1.83
CCDC38-204ENST00000546816 ZSCAN23Q3MJ62 389 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 XKR6Q5GH73 641 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 CYP4A22Q5TCH4 519 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 ARHGEF16Q5VV41 709 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 PXKQ7Z7A4 578 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 P2RY8Q86VZ1 359 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 ZNF614Q8N883 585 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 BMPERQ8N8U9 685 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 ZNF383Q8NA42 475 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 HSD17B8Q92506 261 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 DAZLQ92904 295 aaKnown RBP3.61□□□□□ -1.83
CCDC38-204ENST00000546816 C18orf12Q96KH6 178 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 DACH2Q96NX9 599 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 IWS1Q96ST2 819 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 PLK3Q9H4B4 646 aa3.61□□□□□ -1.83
CCDC38-204ENST00000546816 SOS1Q07889 1333 aaPredicted RBP3.61□□□□□ -1.83
CCDC38-204ENST00000546816 IGHV4-4A0A075B6R2 117 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 A8MZ25 164 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 PRR32B1ATL7 298 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 GH2P01242 217 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 SNX16P57768 344 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 SNRPD1P62314 119 aaKnown RBP3.6□□□□□ -1.83
CCDC38-204ENST00000546816 DCAF10Q5QP82 559 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 GORABQ5T7V8 394 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 Q6ZSR9 355 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 GALNT5Q7Z7M9 940 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 DNAJC22Q8N4W6 341 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms