RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 TMEM220Q6QAJ8 160 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 FAM151BQ6UXP7 276 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 OOSP2Q86WS3 158 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 HPS6Q86YV9 775 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 SYTL1Q8IYJ3 562 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 CARFQ8N187 725 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 ZBTB2Q8N680 514 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 DTX3LQ8TDB6 740 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 CPT1BQ92523 772 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 SNRNP40Q96DI7 357 aaKnown RBP14.09□□□□□ -0.15
USP15-206ENST00000546718 PACSIN1Q9BY11 444 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 ZCCHC2Q9C0B9 1178 aaKnown RBP14.09□□□□□ -0.15
USP15-206ENST00000546718 NAT10Q9H0A0 1025 aaKnown RBP14.09□□□□□ -0.15
USP15-206ENST00000546718 WWP1Q9H0M0 922 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 KIR3DX1Q9H7L2 352 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 GLOD4Q9HC38 313 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 PCMTD2Q9NV79 361 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 SOHLH2Q9NX45 425 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 IL17CQ9P0M4 197 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 POMT2Q9UKY4 750 aa14.09□□□□□ -0.15
USP15-206ENST00000546718 A0A0A6YYK5 440 aaPredicted RBP14.08□□□□□ -0.16
USP15-206ENST00000546718 ZNF487B1APH4 448 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 CBX6O95503 412 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 KLK3P07288 261 aaPredicted RBP14.08□□□□□ -0.16
USP15-206ENST00000546718 CD68P34810 354 aaPredicted RBP14.08□□□□□ -0.16
USP15-206ENST00000546718 SPAM1P38567 509 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 ANP32AP39687 249 aaKnown RBP14.08□□□□□ -0.16
USP15-206ENST00000546718 CHRNA4P43681 627 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 PDK1Q15118 436 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 PTCHD3Q3KNS1 767 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 SIRPB2Q5JXA9 342 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 LDLRAP1Q5SW96 308 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 FNBP1LQ5T0N5 605 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 TMTC4Q5T4D3 741 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 ZFYVE27Q5T4F4 411 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 KDELC1Q6UW63 502 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 MED25Q71SY5 747 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 TICAM1Q8IUC6 712 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 TMEM102Q8N9M5 508 aaPredicted RBP14.08□□□□□ -0.16
USP15-206ENST00000546718 OR1L3Q8NH93 324 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 C12orf66Q96MD2 445 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 SRPK1Q96SB4 655 aaKnown RBP14.08□□□□□ -0.16
USP15-206ENST00000546718 ASF1BQ9NVP2 202 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 SMOXQ9NWM0 555 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 DNMT3AQ9Y6K1 912 aaPredicted RBP14.08□□□□□ -0.16
USP15-206ENST00000546718 TACC2O95359 2948 aa14.08□□□□□ -0.16
USP15-206ENST00000546718 FER1L5A0AVI2 2057 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 DCHS2Q6V1P9 2916 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 GLYATL1P3A0A0U1RQE8 302 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 LOC285095A0A1B0GVY8 99 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 SLC9B1P1A6NJY1 282 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 APOL1O14791 398 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 PPP1R12AO14974 1030 aaPredicted RBP14.07□□□□□ -0.16
USP15-206ENST00000546718 BUD23O43709 281 aaKnown RBP14.07□□□□□ -0.16
USP15-206ENST00000546718 HLA-DPA1P20036 260 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 PTPN3P26045 913 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 VARSP26640 1264 aaKnown RBP14.07□□□□□ -0.16
USP15-206ENST00000546718 NCF4Q15080 339 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 PRKD1Q15139 912 aaPredicted RBP14.07□□□□□ -0.16
USP15-206ENST00000546718 PPP2R5EQ16537 467 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 PLEKHN1Q494U1 663 aaPredicted RBP14.07□□□□□ -0.16
USP15-206ENST00000546718 TEX44Q53QW1 395 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 CCDC70Q6NSX1 233 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 DET1Q7L5Y6 550 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.07□□□□□ -0.16
USP15-206ENST00000546718 CLIP3Q96DZ5 547 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 RMDN2Q96LZ7 410 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 TEKT5Q96M29 485 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 RANBP9Q96S59 729 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 NRTNQ99748 197 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 TRABDQ9H4I3 376 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 FAM8A1Q9UBU6 413 aa14.07□□□□□ -0.16
USP15-206ENST00000546718 G3BP2Q9UN86 482 aaKnown RBP14.07□□□□□ -0.16
USP15-206ENST00000546718 SMTNL1A8MU46 457 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 TMEM150CB9EJG8 249 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 SGTAO43765 313 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 MSL3P1P0C860 447 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 POLR2CP19387 275 aaPredicted RBP14.06□□□□□ -0.16
USP15-206ENST00000546718 NFKB1P19838 968 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 WNT3AP56704 352 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 DYNLT1P63172 113 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 ZBED6P86452 979 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 VWA5B1Q5TIE3 1220 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 ZDHHC20Q5W0Z9 365 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 ZNF385CQ66K41 422 aaPredicted RBP14.06□□□□□ -0.16
USP15-206ENST00000546718 GLT6D1Q7Z4J2 308 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 MRGPREQ86SM8 312 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 VSIG1Q86XK7 387 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 IQCKQ8N0W5 287 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 SLC25A41Q8N5S1 370 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 LILRA3Q8N6C8 439 aaPredicted RBP14.06□□□□□ -0.16
USP15-206ENST00000546718 OR2L2Q8NH16 312 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 INPP5DQ92835 1189 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 OXNAD1Q96HP4 312 aaPredicted RBP14.06□□□□□ -0.16
USP15-206ENST00000546718 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
USP15-206ENST00000546718 FANCEQ9HB96 536 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 TMEM63CQ9P1W3 806 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 B3GNT3Q9Y2A9 372 aa14.06□□□□□ -0.16
USP15-206ENST00000546718 MGAT4DA6NG13 374 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms