RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TTLL3Q9Y4R7 772 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 CCDC168Q8NDH2 2452 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 MTORP42345 2549 aa14.32□□□□□ -0.12
RTN3-214ENST00000545432 ADGRG4Q8IZF6 3080 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 ARHGAP10A1A4S6 786 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 KLHL33A6NCF5 533 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 OR6C74A6NCV1 312 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 SLC9B1P1A6NJY1 282 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 LRRC53A6NM62 1247 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 PIRTP0C851 137 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 EDN3P14138 238 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 TSFMP43897 325 aaKnown RBP14.31□□□□□ -0.12
RTN3-214ENST00000545432 GBE1Q04446 702 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 PPIDQ08752 370 aaKnown RBP14.31□□□□□ -0.12
RTN3-214ENST00000545432 KRT81Q14533 505 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 ATP13A4Q4VNC1 1196 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 FBXO38Q6PIJ6 1188 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 CLEC1AQ8NC01 280 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 DDHD1Q8NEL9 900 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 NACC2Q96BF6 587 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 TLR10Q9BXR5 811 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 GPR63Q9BZJ6 419 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 RUBCNLQ9H714 662 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 FANCEQ9HB96 536 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.31□□□□□ -0.12
RTN3-214ENST00000545432 MYO1AQ9UBC5 1043 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 IP6K2Q9UHH9 426 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 PSMD13Q9UNM6 376 aa14.31□□□□□ -0.12
RTN3-214ENST00000545432 ZGRF1Q86YA3 2104 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 MATN2O00339 956 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 AURKAO14965 403 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 ZG16O60844 167 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 CD63P08962 238 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 HBQ1P09105 142 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 GLRBP48167 497 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 ART3Q13508 389 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 GTF2H3Q13889 308 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 NFE2L1Q14494 772 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 NAA30Q147X3 362 aaPredicted RBP14.3□□□□□ -0.12
RTN3-214ENST00000545432 PDK2Q15119 407 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 LLGL1Q15334 1064 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 PTCHD3Q3KNS1 767 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 ANO6Q4KMQ2 910 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 TMEM220Q6QAJ8 160 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 BEND7Q8N7W2 519 aaPredicted RBP14.3□□□□□ -0.12
RTN3-214ENST00000545432 ANKRD20A12PQ8NF67 263 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 PPP4R1Q8TF05 950 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 COG1Q8WTW3 980 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 LRRN4Q8WUT4 740 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 FAR1Q8WVX9 515 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 RELTQ969Z4 430 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 C17orf62Q9BQA9 187 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 SLC25A51Q9H1U9 297 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 SERTAD3Q9UJW9 196 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 ACSL5Q9ULC5 683 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 PADI2Q9Y2J8 665 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 SPO11Q9Y5K1 396 aa14.3□□□□□ -0.12
RTN3-214ENST00000545432 KLF2Q9Y5W3 355 aaPredicted RBP14.3□□□□□ -0.12
RTN3-214ENST00000545432 PKDREJQ9NTG1 2253 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 MGAT4DA6NG13 374 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 F5H423 210 aaPredicted RBP14.29□□□□□ -0.12
RTN3-214ENST00000545432 KCNK1O00180 336 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 GAPDHSO14556 408 aaPredicted RBP14.29□□□□□ -0.12
RTN3-214ENST00000545432 NDST3O95803 873 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 LDLRAP1Q5SW96 308 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 ZDHHC20Q5W0Z9 365 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 MRPL14Q6P1L8 145 aaKnown RBP14.29□□□□□ -0.12
RTN3-214ENST00000545432 RBM43Q6ZSC3 357 aaKnown RBP14.29□□□□□ -0.12
RTN3-214ENST00000545432 NT5DC3Q86UY8 548 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 TTC30BQ8N4P2 665 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 BTBD6Q96KE9 485 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 LINC00615Q96LM1 132 aaPredicted RBP14.29□□□□□ -0.12
RTN3-214ENST00000545432 TTC25Q96NG3 672 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 SLX1AQ9BQ83 275 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 WDR77Q9BQA1 342 aaPredicted RBP14.29□□□□□ -0.12
RTN3-214ENST00000545432 ZCCHC2Q9C0B9 1178 aaKnown RBP14.29□□□□□ -0.12
RTN3-214ENST00000545432 CHRNA10Q9GZZ6 450 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 TRABDQ9H4I3 376 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 IMP3Q9NV31 184 aaKnown RBP14.29□□□□□ -0.12
RTN3-214ENST00000545432 SMOXQ9NWM0 555 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 SOHLH2Q9NX45 425 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 P4HTMQ9NXG6 502 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 IL17CQ9P0M4 197 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 OSGIN2Q9Y236 505 aa14.29□□□□□ -0.12
RTN3-214ENST00000545432 A0A1B0GUH1 482 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 LOC285095A0A1B0GVY8 99 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 A0A1W2PQJ5 194 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 TMEM150CB9EJG8 249 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 C9J4A7 227 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 ZNF749O43361 778 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 SVILO95425 2214 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 CYP1A2P05177 515 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 ST6GAL1P15907 406 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 CYP2A7P20853 494 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 AGXTP21549 392 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 NDUFS1P28331 727 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 PRDX3P30048 256 aaKnown RBP14.28□□□□□ -0.12
RTN3-214ENST00000545432 OTX2P32243 289 aa14.28□□□□□ -0.12
RTN3-214ENST00000545432 PTGER4P35408 488 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms