RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZNF778Q96MU6 729 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CDK15Q96Q40 435 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 KCNA7Q96RP8 456 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CORO1BQ9BR76 489 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 DGCR6LQ9BY27 220 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SEZ6LQ9BYH1 1024 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 TNKS2Q9H2K2 1166 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 RPRD1BQ9NQG5 326 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 MIEF1Q9NQG6 463 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 LCHNA4D1U4 455 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 WASH4PA8MWX3 477 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CDC7O00311 574 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 RFXANKO14593 260 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SCELO95171 688 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 LRATO95237 230 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 THRBP10828 461 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CYBAP13498 195 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 LAG3P18627 525 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 RHDQ02161 417 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 NRG1Q02297 640 aaPredicted RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 RFX4Q33E94 735 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 KCTD11Q693B1 232 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 PRR23BQ6ZRT6 265 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 ZNF280BQ86YH2 543 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 MARVELD2Q8N4S9 558 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 LEMD2Q8NC56 503 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 OR4A15Q8NGL6 344 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CLHC1Q8NHS4 586 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CD99L2Q8TCZ2 262 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SLC39A3Q9BRY0 314 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 PCDH12Q9NPG4 1184 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 AHSPQ9NZD4 102 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CCDC59Q9P031 241 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 SPATA2Q9UM82 520 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 DUSP12Q9UNI6 340 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SNX8Q9Y5X2 465 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 A0A0D9SEW6 157 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 F8W810 466 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 DENRO43583 198 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 FGF19O95750 216 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ZNF37AP17032 561 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 RPL17P18621 184 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 ADRA1AP35348 466 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 MAGEA10P43363 369 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 RPS24P62847 133 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 GPR17Q13304 367 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CPSF6Q16630 551 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS50-220ENST00000544910 NADK2Q4G0N4 442 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 XKR4Q5GH76 650 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ANXA8L1Q5VT79 327 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CYP20A1Q6UW02 462 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 THAP5Q7Z6K1 395 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TTC30BQ8N4P2 665 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SCAIQ8N9R8 606 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 BPIFB6Q8NFQ5 453 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 RHEBL1Q8TAI7 183 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 LRRC3Q9BY71 257 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SPRTNQ9H040 489 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 TREX1Q9NSU2 369 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 DNAJC11Q9NVH1 559 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ZNHIT2Q9UHR6 403 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CNOT11Q9UKZ1 510 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 COL11A1P12107 1806 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 DOCK5Q9H7D0 1870 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 A6NHS1 94 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 PTGES3LE9PB15 166 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 PARNO95453 639 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 SEC24AO95486 1093 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 EPOP01588 193 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CATP04040 527 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 RAP2AP10114 183 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 WEE1P30291 646 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CRATP43155 626 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SLC11A1P49279 550 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ANXA11P50995 505 aaKnown RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 RING1Q06587 406 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 MERTKQ12866 999 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 COX10Q12887 443 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 PTPRCAPQ14761 206 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TSC22D1Q15714 1073 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 CCNYL2Q5T2Q4 361 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TPGS2Q68CL5 300 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TUBA3EQ6PEY2 450 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 GALNT7Q86SF2 657 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 KBTBD6Q86V97 674 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 DCBLD1Q8N8Z6 715 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 GLB1L3Q8NCI6 653 aaPredicted RBP5.7□□□□□ -1.5
VPS50-220ENST00000544910 C3orf58Q8NDZ4 430 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 KBTBD8Q8NFY9 601 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 OR9I1Q8NGQ6 314 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 DNAJB8Q8NHS0 232 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 MAPK15Q8TD08 544 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 EEF1AKMT1Q8WVE0 214 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 SLC13A3Q8WWT9 602 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 NT5C3BQ969T7 300 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 ISL2Q96A47 359 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 PRRG3Q9BZD7 231 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 HIPK3Q9H422 1215 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 TMCC3Q9ULS5 477 aa5.7□□□□□ -1.5
VPS50-220ENST00000544910 PADI4Q9UM07 663 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms