RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 A0A096LPK6 155 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 PRSS38A1L453 326 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 GPR39O43194 453 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 PIAS2O75928 621 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 SRP72O76094 671 aaKnown RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 RASGRP1O95267 797 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 PRAMEF1O95521 474 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 FUCA1P04066 466 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 CEACAM1P13688 526 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 JUNDP17535 347 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 CSRP1P21291 193 aaKnown RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 FDXRP22570 491 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 DGKAP23743 735 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 CRABP2P29373 138 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 GMPRP36959 345 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 CCT5P48643 541 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 TTPAP49638 278 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 BLKP51451 505 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 HK3P52790 923 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 ADARP55265 1226 aaKnown RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 CDKN2DP55273 166 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 SRP54P61011 504 aaKnown RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 RAB10P61026 200 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 HNRNPKP61978 463 aaKnown RBP eCLIP10.43□□□□□ -0.74
ATL3-204ENST00000540699 IRF9Q00978 393 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 ITGA9Q13797 1035 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 CHRNA6Q15825 494 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 ATP13A5Q4VNC0 1218 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 ZRANB3Q5FWF4 1079 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 AARS2Q5JTZ9 985 aaKnown RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 PRAMEF14Q5SWL7 426 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 RNF187Q5TA31 235 aaPredicted RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 HECTD2Q5U5R9 776 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 FAM45BPQ6NSW5 357 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 ENPP7Q6UWV6 458 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 FAM151BQ6UXP7 276 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 CERS6Q6ZMG9 384 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 RGS9BPQ6ZS82 235 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 SNX20Q7Z614 316 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 PIP4P1Q86T03 277 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 LCA5Q86VQ0 697 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 PHACTR4Q8IZ21 702 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 CENPLQ8N0S6 344 aaPredicted RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 PLD6Q8N2A8 252 aaKnown RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 GPATCH11Q8N954 259 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 FAM45AQ8TCE6 357 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 OR1E3Q8WZA6 343 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 PDXPQ96GD0 296 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 MAGEB18Q96M61 343 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 ZNF317Q96PQ6 595 aaPredicted RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 FAM111AQ96PZ2 611 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 NDNQ99608 321 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 SLC13A1Q9BZW2 595 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 CAAP1Q9H8G2 361 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 DNAJC28Q9NX36 388 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 KLQ9UEF7 1012 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 DCDC2Q9UHG0 476 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 MED16Q9Y2X0 877 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 OAS3Q9Y6K5 1087 aaKnown RBP10.43□□□□□ -0.74
ATL3-204ENST00000540699 CSNK1G3Q9Y6M4 447 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 SLC30A1Q9Y6M5 507 aa10.43□□□□□ -0.74
ATL3-204ENST00000540699 ANKRD11Q6UB99 2663 aaPredicted RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 ASXL3Q9C0F0 2248 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 C1QTNF9BB2RNN3 333 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 GPR89AB7ZAQ6 455 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 H3BM21 787 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 INPP4BO15327 924 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 FLRT2O43155 660 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 PHGDHO43175 533 aaKnown RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 VEGFDO43915 354 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 PLIN3O60664 434 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 DNAJC6O75061 913 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 PROCP04070 461 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 C1QTNF9P0C862 333 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 GPR89BP0CG08 455 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 GIMD1P0DJR0 217 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 COL6A2P12110 1019 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 STMN1P16949 149 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 ITGALP20701 1170 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 CD9P21926 228 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 SERPINB4P48594 390 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 PGGT1BP53609 377 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 IL9RQ01113 521 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 FOXC1Q12948 553 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 DLG1Q12959 904 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 BNIP3Q12983 259 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 NFATC2Q13469 925 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 ZNF460Q14592 562 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 SUZ12Q15022 739 aaKnown RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 DBN1Q16643 649 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 PDK4Q16654 411 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 UAP1L1Q3KQV9 507 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 GPR33Q49SQ1 333 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 TAF1BQ53T94 588 aaPredicted RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 ZNF542PQ5EBM4 170 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 CTSL3PQ5NE16 218 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 HHATQ5VTY9 493 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 UNQ6494/PRO21346Q6UXR6 183 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 CCDC91Q7Z6B0 441 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms