RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 TRAF7Q6Q0C0 670 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 NECAB2Q7Z6G3 386 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 OSTM1Q86WC4 334 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 P3H2Q8IVL5 708 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 CDK15Q96Q40 435 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 APOL4Q9BPW4 351 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 RHNO1Q9BSD3 238 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 NFKBIZQ9BYH8 718 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ADPRHL2Q9NX46 363 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 CD274Q9NZQ7 290 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 HACL1Q9UJ83 578 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 WBP11Q9Y2W2 641 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 POLR3HQ9Y535 204 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 PCDHGA10Q9Y5H3 936 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 BTN3A1O00481 513 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 MATN3O15232 486 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 DFNA5O60443 496 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 OR4F21O95013 312 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 FYNP06241 537 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 PIRTP0C851 137 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 MSH3P20585 1137 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 ENDOUP21128 410 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 DCTP40126 519 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 AGTR2P50052 363 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 SCAPQ12770 1279 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 RFX4Q33E94 735 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 MRNIPQ6NTE8 343 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 FKBP9P1Q75LS8 142 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 DCP2Q8IU60 420 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 OR7G1Q8NGA0 311 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 SLIRPQ9GZT3 109 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 SARS2Q9NP81 518 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 UGT2A1Q9Y4X1 527 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 ANGPTL3Q9Y5C1 460 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 AREL1O15033 823 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 S1PR4O95977 384 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 PTTG1O95997 202 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 PTPRCAPQ14761 206 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 C6orf136Q5SQH8 315 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 SLC27A1Q6PCB7 646 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 RANBP10Q6VN20 620 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 METTL6Q8TCB7 284 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 ZNF300Q96RE9 604 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 MMP27Q9H306 513 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 CATSPERBQ9H7T0 1116 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 CARS2Q9HA77 564 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 PDGFCQ9NRA1 345 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 GALPQ9UBC7 116 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 PCDHB14Q9Y5E9 798 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 N6AMT1Q9Y5N5 214 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 COL11A1P12107 1806 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 ELOVL7A1L3X0 281 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 CXCR6O00574 342 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 ZW10O43264 779 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 CLK3P49761 638 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 RACK1P63244 317 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 PLEKHG6Q3KR16 790 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 B3GNT8Q7Z7M8 397 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 SYVN1Q86TM6 617 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 HIPK1Q86Z02 1210 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 GALNT13Q8IUC8 556 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 LACC1Q8IV20 430 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 AADATQ8N5Z0 425 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 MTMR14Q8NCE2 650 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 KLHL5Q96PQ7 755 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 TMEM246Q9BRR3 403 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 ZIM2Q9NZV7 527 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 MPP6Q9NZW5 540 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 BTBD3Q9Y2F9 522 aa12.66□□□□□ -0.38
SFSWAP-209ENST00000540469 AGAP5A6NIR3 686 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 CENPBD1B2RD01 187 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 HSMCR30P0CW71 290 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 UROSP10746 265 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 G6PDP11413 515 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 AKT1P31749 480 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 KRT6CP48668 564 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 NFKB2Q00653 900 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 TIGD7Q6NT04 549 aaPredicted RBP12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 ZNF544Q6NX49 715 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 GPRIN3Q6ZVF9 776 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 RFPL4BQ6ZWI9 263 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 GPRIN1Q7Z2K8 1008 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 TAC4Q86UU9 113 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 GALNT12Q8IXK2 581 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 METTL4Q8N3J2 472 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 ATG16L2Q8NAA4 619 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 PROKR1Q8TCW9 393 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 PPP1R13LQ8WUF5 828 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 SMPD4Q9NXE4 827 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 SNX8Q9Y5X2 465 aa12.65□□□□□ -0.38
SFSWAP-209ENST00000540469 SLC7A4O43246 635 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms