RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ZNF398Q8TD17 642 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 P3H4Q92791 437 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 C12orf66Q96MD2 445 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 FSD1LQ9BXM9 530 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 ING2Q9H160 280 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 ACSS2Q9NR19 701 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 ABHD10Q9NUJ1 306 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 SAE1Q9UBE0 346 aaPredicted RBP11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 SLC24A2Q9UI40 661 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 TRHDEQ9UKU6 1024 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 COLEC10Q9Y6Z7 277 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 HACD1B0YJ81 288 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 CBFA2T2O43439 604 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 SORBS2O94875 1100 aaKnown RBP11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 PRAMEF1O95521 474 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 TPM1P09493 284 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 SLC35G4P0C7Q5 338 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 MSL3P1P0C860 447 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 PBLDP30039 288 aaPredicted RBP11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 RPS18P62269 152 aaKnown RBP11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 PRKAA1Q13131 559 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 TFDP3Q5H9I0 405 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 FHL5Q5TD97 284 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 CPZQ66K79 652 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 SPOCD1Q6ZMY3 1216 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 ADAMTS17Q8TE56 1095 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 CPT1BQ92523 772 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 MR1Q95460 341 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 QKIQ96PU8 341 aaKnown RBP eCLIP11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 CHP1Q99653 195 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 C19orf43Q9BQ61 176 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 CCM2Q9BSQ5 444 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 WWP1Q9H0M0 922 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 CHST8Q9H2A9 424 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 NHEJ1Q9H9Q4 299 aaPredicted RBP11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 FANCEQ9HB96 536 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 C1GALT1Q9NS00 363 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 SPTLC3Q9NUV7 552 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 MAP4K5Q9Y4K4 846 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 HEBP2Q9Y5Z4 205 aa11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 CFAP20Q9Y6A4 193 aaKnown RBP11.7□□□□□ -0.54
CBX3P4-202ENST00000540428 hCG_1818297A0A087WSY0 165 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 OR6C74A6NCV1 312 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 C5orf60A6NFR6 353 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 ARGFXA6NJG6 315 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 C2orf81A6NN90 581 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 AGAP14A8MT82 685 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 MEN1O00255 615 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 BUD23O43709 281 aaKnown RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 CEACAM4O75871 244 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 SRP72O76094 671 aaKnown RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 AGFG2O95081 481 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 ZRANB2O95218 330 aaKnown RBP eCLIP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 TNNT1P13805 278 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 GNLYP22749 145 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 VARSP26640 1264 aaKnown RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 UQCRFS1P47985 274 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 KPNA2P52292 529 aaKnown RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 GEMP55040 296 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 TAF1AQ15573 450 aaPredicted RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 GPR19Q15760 415 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 C4orf17Q53FE4 359 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 PLEKHS1Q5SXH7 462 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 KAZNQ674X7 775 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 DUS1LQ6P1R4 473 aaKnown RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 ZC3H18Q86VM9 953 aaKnown RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 KATNAL2Q8IYT4 538 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 DSELQ8IZU8 1212 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 SLC38A9Q8NBW4 561 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 NLNQ9BYT8 704 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 ASB8Q9H765 288 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 CUEDC1Q9NWM3 386 aaPredicted RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 SOHLH2Q9NX45 425 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 POMT2Q9UKY4 750 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 G3BP2Q9UN86 482 aaKnown RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 ZNF451Q9Y4E5 1061 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 HYOU1Q9Y4L1 999 aa11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 USP9YO00507 2555 aaPredicted RBP11.69□□□□□ -0.54
CBX3P4-202ENST00000540428 C17orf113A0A1B0GUU1 675 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 SGTAO43765 313 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 DPM1O60762 260 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 MFAP3LO75121 409 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 ANXA9O76027 345 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 RALBP11234 206 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 CDH3P22223 829 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 RORAP35398 523 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 PTGIRP43119 386 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 PRLHRP49683 370 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 CCL11P51671 97 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 ADCY2Q08462 1091 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 CHAF1BQ13112 559 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 GSE1Q14687 1217 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 NADK2Q4G0N4 442 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 ITPRIPL1Q6GPH6 555 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 RANBP10Q6VN20 620 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 DET1Q7L5Y6 550 aa11.68□□□□□ -0.54
CBX3P4-202ENST00000540428 LURAP1LQ8IV03 231 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms