RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SNX10Q9Y5X0 201 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 PLOD3O60568 738 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 ACTR1BP42025 376 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 CTSOP43234 321 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-205ENST00000538291 ACTR1AP61163 376 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 TLE2Q04725 743 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 SLC1A5Q15758 541 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 TMEM164Q5U3C3 297 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 METTL21CQ5VZV1 264 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 CRELD2Q6UXH1 353 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-205ENST00000538291 NUP54Q7Z3B4 507 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 COX18Q8N8Q8 333 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 TRIM2Q9C040 744 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 ING3Q9NXR8 418 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 CLDND1Q9NY35 253 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 INSL6Q9Y581 213 aa16.6■□□□□ 0.25
SCARB1-205ENST00000538291 IL12AP29459 219 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 HSD17B2P37059 387 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 C1QTNF8P60827 252 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 SMU1Q2TAY7 513 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 C2orf27AQ580R0 203 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 CLEC6AQ6EIG7 209 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 SLC30A6Q6NXT4 461 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 GALNT5Q7Z7M9 940 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 PQLC1Q8N2U9 271 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 FADS3Q9Y5Q0 445 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 A0A1W2PRU2 124 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 PLK4O00444 970 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 NMBRP28336 390 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 PUS10Q3MIT2 529 aaKnown RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 ARL13AQ5H913 290 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 PERM1Q5SV97 790 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.59■□□□□ 0.255e-7■■■■□ 22.8
SCARB1-205ENST00000538291 GSTCDQ8NEC7 633 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 HAVCR1Q96D42 359 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 NUS1Q96E22 293 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 SPATA9Q9BWV2 254 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 INTS10Q9NVR2 710 aaKnown RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 IGLV3-22A0A075B6J6 115 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 OR4F21O95013 312 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 FSHRP23945 695 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 STARP49675 285 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 CRHR2Q13324 411 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 PARP8Q8N3A8 854 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 TFAP2BQ92481 460 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 C7orf26Q96N11 449 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 WDR26Q9H7D7 661 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 DHRS7Q9Y394 339 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 RBM47A0AV96 593 aaKnown RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 ARVCFO00192 962 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 SCELO95171 688 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 ZBTB11O95625 1053 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 CYB5AP00167 134 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 COL6A1P12109 1028 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 CSKP41240 450 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 GRK6P43250 576 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 PLA2G16P53816 162 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 MPP5Q8N3R9 675 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 LIX1Q8N485 282 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 HMGB4Q8WW32 186 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 MCCC2Q9HCC0 563 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 RUVBL1Q9Y265 456 aaKnown RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 YJEFN3A6XGL0 299 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 ADAMDEC1O15204 470 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 CLUP10909 449 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 LIPEQ05469 1076 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 AMZ1Q400G9 498 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 TIGD5Q53EQ6 642 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 TCEAL6Q6IPX3 200 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 FRRS1Q6ZNA5 592 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 DNAJB7Q7Z6W7 309 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 FATE1Q969F0 183 aa16.59■□□□□ 0.25
SCARB1-205ENST00000538291 POLR3BQ9NW08 1133 aaPredicted RBP16.59■□□□□ 0.25
SCARB1-205ENST00000538291 WNT9AO14904 365 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 RLN1P04808 185 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 CD48P09326 243 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 DDX6P26196 483 aaKnown RBP eCLIP16.58■□□□□ 0.255e-18■■□□□ 12.4
SCARB1-205ENST00000538291 NDUFS1P28331 727 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 SIM2Q14190 667 aaPredicted RBP16.58■□□□□ 0.25
SCARB1-205ENST00000538291 SLC35G5Q96KT7 338 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 HIST1H2AAQ96QV6 131 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 EBPLQ9BY08 206 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 FZD8Q9H461 694 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 RSL24D1Q9UHA3 163 aaKnown RBP16.58■□□□□ 0.25
SCARB1-205ENST00000538291 CDC14AQ9UNH5 594 aa16.58■□□□□ 0.25
SCARB1-205ENST00000538291 ARHGEF28Q8N1W1 1705 aaKnown RBP16.58■□□□□ 0.25
SCARB1-205ENST00000538291 NRP1O14786 923 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 CLCN7P51798 805 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 PGDP52209 483 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 IFNL1Q8IU54 200 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 OR5T3Q8NGG3 340 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 C12orf42Q96LP6 360 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 DPYSL5Q9BPU6 564 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 EIF2B4Q9UI10 523 aaKnown RBP16.58■□□□□ 0.24
SCARB1-205ENST00000538291 TLR6Q9Y2C9 796 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 MAGEB17A8MXT2 336 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 PDPK1O15530 556 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 IRAK2O43187 625 aa16.58■□□□□ 0.24
SCARB1-205ENST00000538291 FADS2O95864 444 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms