RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HSDL1Q3SXM5 330 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 Q5BKY6 102 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 NXNL2Q5VZ03 156 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 CNKSR3Q6P9H4 555 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 NRARPQ7Z6K4 114 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 ELMO1Q92556 727 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 YIPF6Q96EC8 236 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 FYTTD1Q96QD9 318 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 KIF17Q9P2E2 1029 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 CYP3A5P20815 502 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 PPM1AP35813 382 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 TEKQ02763 1124 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 SPIRE1Q08AE8 756 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 IFRD2Q12894 506 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 NOMO1Q15155 1222 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 TXNRD3NBQ6F5E7 133 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 PM20D1Q6GTS8 502 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 BRAT1Q6PJG6 821 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 CDKL3Q8IVW4 592 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 CCDC117Q8IWD4 279 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 CNPY3Q9BT09 278 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 BEX2Q9BXY8 128 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 INTS6Q9UL03 887 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 ANKRD6Q9Y2G4 727 aa10.74□□□□□ -0.69
CLSTN3-207ENST00000537408 MED7O43513 233 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 WDR47O94967 919 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 FTH1P02794 183 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CSTF2P33240 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 MAPKAPK2P49137 400 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ERVK-21P61565 698 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 PURAQ00577 322 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CLCA4Q14CN2 919 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 LRRC26Q2I0M4 334 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 C1orf220Q5T0J3 134 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ZYG11AQ6WRX3 759 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 IFNEQ86WN2 208 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 TCTE3Q8IZS6 198 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 MARC2Q969Z3 335 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 OPALINQ96PE5 141 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 FAM83DQ9H4H8 585 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 TAS2R7Q9NYW3 318 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 KLHL21Q9UJP4 597 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 MAN2B2Q9Y2E5 1009 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 SSC5DA1L4H1 1573 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 WDR27A2RRH5 827 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 TRIM3O75382 744 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 UGT2B17O75795 530 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 MAPTP10636 758 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 HSD17B1P14061 328 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 NAGLUP54802 743 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 UGT2B15P54855 530 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 POU5F1BQ06416 359 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 FADDQ13158 208 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 TIGD3Q6B0B8 471 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 BEND5Q7L4P6 421 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 NIPA2Q8N8Q9 360 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 TXNDC5Q8NBS9 432 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 OR6B3Q8NGW1 331 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 PPP1R13LQ8WUF5 828 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 SCLYQ96I15 445 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 GPR20Q99678 358 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 NAT9Q9BTE0 207 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 PI4K2AQ9BTU6 479 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ACE2Q9BYF1 805 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 SDCBP2Q9H190 292 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 EML4Q9HC35 981 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 DYRK4Q9NR20 520 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 TMLHEQ9NVH6 421 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF358Q9NW07 568 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ZDHHC2Q9UIJ5 367 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 PCDHGB3Q9Y5G1 929 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF98A6NK75 572 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CLDN24A6NM45 220 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 APOL1O14791 398 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 SLC22A5O76082 557 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CNTN5O94779 1100 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ANGPTL1O95841 491 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 PROS1P07225 676 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ADRB2P07550 413 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 PGAM1P18669 254 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 MYL9P24844 172 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 GZMKP49863 264 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 SNRPD2P62316 118 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CYP4F2P78329 520 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CYP4F3Q08477 520 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CBLBQ13191 982 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ZBTB41Q5SVQ8 909 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 TMEM65Q6PI78 240 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CBWD2Q8IUF1 395 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 FAM9CQ8IZT9 166 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 CPA6Q8N4T0 437 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 ZBTB44Q8NCP5 570 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 KIF12Q96FN5 646 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 FRMD6Q96NE9 622 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 BTBD2Q9BX70 525 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 NGRNQ9NPE2 291 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 PAK6Q9NQU5 681 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 PCDHB16Q9NRJ7 776 aa10.73□□□□□ -0.69
CLSTN3-207ENST00000537408 C3orf18Q9UK00 162 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms