RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 ASNA1O43681 348 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 STX10O60499 249 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 MTA2O94776 668 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 TSPAN12O95859 305 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 CPP00450 1065 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 CELA2AP08217 269 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 NID1P14543 1247 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 IL4RP24394 825 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 PREPP48147 710 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 LMAN1P49257 510 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 SCNN1BP51168 640 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 DCDP81605 110 aaKnown RBP9.15□□□□□ -0.94
CPSF7-217ENST00000537162 PTSQ03393 145 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 MEA1Q16626 185 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 ZCWPW2Q504Y3 356 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 PDLIM3Q53GG5 364 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-217ENST00000537162 KRTCAP3Q53RY4 240 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 ARSKQ6UWY0 536 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 SIAH3Q8IW03 269 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 C1orf131Q8NDD1 294 aaKnown RBP9.15□□□□□ -0.94
CPSF7-217ENST00000537162 LMO3Q8TAP4 145 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 TBC1D31Q96DN5 1066 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 KCTD15Q96SI1 283 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-217ENST00000537162 HES7Q9BYE0 225 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 KLHL25Q9H0H3 589 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 RMI1Q9H9A7 625 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 ZNF160Q9HCG1 818 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 FAM207AQ9NSI2 230 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-217ENST00000537162 BEX4Q9NWD9 120 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-217ENST00000537162 CBLCQ9ULV8 474 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 STAP1Q9ULZ2 295 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 CNTN6Q9UQ52 1028 aa9.15□□□□□ -0.94
CPSF7-217ENST00000537162 OR6C74A6NCV1 312 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 WASH4PA8MWX3 477 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 POLR2DO15514 142 aaKnown RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 ARHGEF9O43307 516 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 PRAMEF11O60813 436 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 KRT5P13647 590 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 ST6GAL1P15907 406 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 ITGAXP20702 1163 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 ST13P50502 369 aaKnown RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 ALDH6A1Q02252 535 aaKnown RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 SLC39A14Q15043 492 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 INSCQ1MX18 579 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 NKAIN1Q4KMZ8 207 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 TDRD12Q587J7 1177 aaKnown RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 C10orf62Q5T681 223 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 LRRC66Q68CR7 880 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 SHC4Q6S5L8 630 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 RBM12BQ8IXT5 1001 aaKnown RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 PYROXD2Q8N2H3 581 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 RTL3Q8N8U3 475 aaKnown RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 SEC16BQ96JE7 1060 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 USP28Q96RU2 1077 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 C17orf62Q9BQA9 187 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 GTPBP4Q9BZE4 634 aaKnown RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 SCAND2PQ9GZW5 306 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 SPRTNQ9H040 489 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-217ENST00000537162 OR2AG1Q9H205 316 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 GDPD2Q9HCC8 539 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 SERTAD3Q9UJW9 196 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 RYR3Q15413 4870 aa9.14□□□□□ -0.95
CPSF7-217ENST00000537162 A0A0G2JK05 382 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 PRRG2O14669 202 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 MED7O43513 233 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 CYP2A6P11509 494 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-217ENST00000537162 ZNF7P17097 686 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-217ENST00000537162 GNA15P30679 374 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 KIR2DL3P43628 341 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 TMPRSS15P98073 1019 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 ATP11AP98196 1134 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 TRAF2Q12933 501 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 GALNT3Q14435 633 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
CPSF7-217ENST00000537162 RHBDD2Q6NTF9 364 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 HIBCHQ6NVY1 386 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-217ENST00000537162 CDHR3Q6ZTQ4 885 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 USP45Q70EL2 814 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 YTHDF3Q7Z739 585 aaKnown RBP9.13□□□□□ -0.95
CPSF7-217ENST00000537162 CD163Q86VB7 1156 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 NLRP8Q86W28 1048 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 P3H2Q8IVL5 708 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 ZNF547Q8IVP9 402 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 CCDC185Q8N715 623 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 SLC35C1Q96A29 364 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 SCRN2Q96FV2 425 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 MCCC1Q96RQ3 725 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-217ENST00000537162 SPSB2Q99619 263 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 NRTNQ99748 197 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 CARD9Q9H257 536 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 SP110Q9HB58 689 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 ZFYVE1Q9HBF4 777 aa9.13□□□□□ -0.95
CPSF7-217ENST00000537162 MRPS2Q9Y399 296 aaKnown RBP9.13□□□□□ -0.95
CPSF7-217ENST00000537162 PHF3Q92576 2039 aaKnown RBP9.12□□□□□ -0.95
CPSF7-217ENST00000537162 A0A1W2PPR1 153 aa9.12□□□□□ -0.95
CPSF7-217ENST00000537162 PALMO75781 387 aa9.12□□□□□ -0.95
CPSF7-217ENST00000537162 HBQ1P09105 142 aa9.12□□□□□ -0.95
CPSF7-217ENST00000537162 PRR35P0CG20 571 aa9.12□□□□□ -0.95
CPSF7-217ENST00000537162 POLR2CP19387 275 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms