RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ZNF451Q9Y4E5 1061 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 HEBP2Q9Y5Z4 205 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 COLEC10Q9Y6Z7 277 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 TRBV5-4A0A0C4DH59 114 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 H7C0S8 307 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 MEN1O00255 615 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 UGT1A9O60656 530 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 VPS4BO75351 444 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 PMPCBO75439 489 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 KATNA1O75449 491 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 SCRG1O75711 98 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 KLK3P07288 261 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 EBLN1P0CF75 366 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 UGT1A6P19224 532 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 UGT1A1P22309 533 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 UGT1A4P22310 534 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 CA5AP35218 305 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 PRLHRP49683 370 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 PGDP52209 483 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 MLLT10P55197 1068 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 RPA4Q13156 261 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 GPS2Q13227 327 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 IL10RAQ13651 578 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 NFE2L1Q14494 772 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 PLCL1Q15111 1095 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 TAF1AQ15573 450 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 SEPT7Q16181 437 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 PPP2R5EQ16537 467 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 PCSK7Q16549 785 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 TFDP3Q5H9I0 405 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 TMTC4Q5T4D3 741 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 CAVIN1Q6NZI2 390 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 TMEM220Q6QAJ8 160 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 BBS12Q6ZW61 710 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 KATNAL2Q8IYT4 538 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 ZNF567Q8N184 647 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 ACVR1CQ8NER5 493 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 CPT1CQ8TCG5 803 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 ZNF398Q8TD17 642 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 CPLX3Q8WVH0 158 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 CPT1BQ92523 772 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 PNPLA2Q96AD5 504 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 QKIQ96PU8 341 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 SLC25A23Q9BV35 468 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 UGT1A7Q9HAW7 530 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 UGT1A10Q9HAW8 530 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 UGT1A8Q9HAW9 530 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 FEZ2Q9UHY8 353 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 TCFL5Q9UL49 500 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 VPS4AQ9UN37 437 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 PKP3Q9Y446 797 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 CRYBG3Q68DQ2 2970 aa10.92□□□□□ -0.66
CLSTN3-206ENST00000535668 hCG_1818297A0A087WSY0 165 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 UBA6A0AVT1 1052 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 KLHL41O60662 606 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 CST8O60676 142 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 DPM1O60762 260 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 KLF7O75840 302 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 ANXA9O76027 345 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 LCA5LO95447 670 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 ONECUT2O95948 504 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 CD63P08962 238 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 HBQ1P09105 142 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 NFKB1P19838 968 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 NR1D1P20393 614 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 PTPN7P35236 360 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 PPM1FP49593 454 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 KPNA2P52292 529 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 COPS2P61201 443 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 ADCY2Q08462 1091 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 PLA2G4EQ3MJ16 856 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 GPR33Q49SQ1 333 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 CRB2Q5IJ48 1285 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 FHL5Q5TD97 284 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 JMJD6Q6NYC1 403 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 NPNTQ6UXI9 565 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 GLT6D1Q7Z4J2 308 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 RCOR2Q8IZ40 523 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 Q8NA96 180 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 HM13Q8TCT9 377 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 P3H4Q92791 437 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 CALR3Q96L12 384 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 PPP1R2P1Q96PQ5 205 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 C17orf62Q9BQA9 187 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 GORASP1Q9BQQ3 440 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 CEP41Q9BYV8 373 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 OR52A5Q9H2C5 316 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 BPIFA1Q9NP55 256 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 ABHD10Q9NUJ1 306 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 PCMTD2Q9NV79 361 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 IFNKQ9P0W0 207 aa10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 PLEKHB1Q9UF11 243 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-206ENST00000535668 CACNA1DQ01668 2161 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 FER1L5A0AVI2 2057 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 BLACEA4D250 179 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 C2orf81A6NN90 581 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 TTLL8A6PVC2 850 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 APOC4-APOC2K7ER74 178 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 AKR1B10O60218 316 aa10.9□□□□□ -0.66
CLSTN3-206ENST00000535668 DNAJB5O75953 348 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms