RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 RBM48Q5RL73 367 aaKnown RBP6.54□□□□□ -1.36
USP28-202ENST00000535607 AGAP7PQ5VUJ5 663 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 LRRC8EQ6NSJ5 796 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 FAM45BPQ6NSW5 357 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 DCLRE1AQ6PJP8 1040 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 ZNF773Q6PK81 442 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 MAMDC4Q6UXC1 1216 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 ZYG11AQ6WRX3 759 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 PDZD4Q76G19 769 aaPredicted RBP6.54□□□□□ -1.36
USP28-202ENST00000535607 CAND1Q86VP6 1230 aaKnown RBP6.54□□□□□ -1.36
USP28-202ENST00000535607 EXOC8Q8IYI6 725 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 CPA6Q8N4T0 437 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 DHRSXQ8N5I4 330 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 OR2T34Q8NGX1 318 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 OR2T3Q8NH03 318 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 FAM45AQ8TCE6 357 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 OSCP1Q8WVF1 389 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 TMA16Q96EY4 203 aaKnown RBP6.54□□□□□ -1.36
USP28-202ENST00000535607 CENPNQ96H22 339 aaPredicted RBP6.54□□□□□ -1.36
USP28-202ENST00000535607 SLC45A3Q96JT2 553 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 CEP170P1Q96L14 293 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 ZNF641Q96N77 438 aaPredicted RBP6.54□□□□□ -1.36
USP28-202ENST00000535607 PPP1R10Q96QC0 940 aaKnown RBP6.54□□□□□ -1.36
USP28-202ENST00000535607 TAAR1Q96RJ0 339 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 YME1L1Q96TA2 773 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 SPATA25Q9BR10 227 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 ZNF670Q9BS34 389 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 MSTO1Q9BUK6 570 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 MROQ9BYG7 248 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 SHCBP1LQ9BZQ2 653 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 C20orf27Q9GZN8 174 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 POLR1BQ9H9Y6 1135 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 NMRAL1Q9HBL8 299 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 CPNE5Q9HCH3 593 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP28-202ENST00000535607 WRAP73Q9P2S5 460 aaPredicted RBP6.54□□□□□ -1.36
USP28-202ENST00000535607 CPA4Q9UI42 421 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 IFT52Q9Y366 437 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 PCDHA10Q9Y5I2 948 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 SNX9Q9Y5X1 595 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 SNX5Q9Y5X3 404 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 UBIAD1Q9Y5Z9 338 aa6.54□□□□□ -1.36
USP28-202ENST00000535607 KIAA1217Q5T5P2 1943 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 C1orf232A0A0U1RR37 186 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 A0A1B0GTL3 188 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 TRIM64A6NGJ6 449 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 MROH6A6NGR9 719 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 SAGE2PA6NJ88 616 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ERI2A8K979 691 aaKnown RBP6.53□□□□□ -1.36
USP28-202ENST00000535607 K7ERI5 159 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 PSMD3O43242 534 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 AQP9O43315 295 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ZBTB14O43829 449 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 NDUFS2O75306 463 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 GPC4O75487 556 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ENDOD1O94919 500 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 RASAL1O95294 804 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 VNN1O95497 513 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 SCGB1D2O95969 90 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ASS1P00966 412 aaKnown RBP6.53□□□□□ -1.36
USP28-202ENST00000535607 C1QAP02745 245 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 RPLP2P05387 115 aaKnown RBP6.53□□□□□ -1.36
USP28-202ENST00000535607 INHBBP09529 407 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 COL6A1P12109 1028 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 CD19P15391 556 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 IL12AP29459 219 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 MIPP30301 263 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 GNL1P36915 607 aaPredicted RBP6.53□□□□□ -1.36
USP28-202ENST00000535607 NAMPTP43490 491 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 KCNC1P48547 511 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ATP4BP51164 291 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 BMXP51813 675 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 PRMT2P55345 433 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 PKNOX1P55347 436 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 MEF2AQ02078 507 aaPredicted RBP6.53□□□□□ -1.36
USP28-202ENST00000535607 OGDHQ02218 1023 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 SP3Q02447 781 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 MALLQ13021 153 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 CEACAM7Q14002 265 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 RAB39AQ14964 217 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ZNF124Q15973 351 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 DGUOKQ16854 277 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 VMACQ2NL98 169 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 SMTNL2Q2TAL5 461 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 LSM12Q3MHD2 195 aaKnown RBP6.53□□□□□ -1.36
USP28-202ENST00000535607 ARL13BQ3SXY8 428 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 SLC9B1Q4ZJI4 515 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 C2CD6Q53TS8 623 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 C6orf10Q5SRN2 563 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ATAD3BQ5T9A4 648 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ANKRD26P1Q6NSI1 321 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 TAF2Q6P1X5 1199 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 SLC2A7Q6PXP3 512 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 DPP9Q86TI2 863 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ZDHHC17Q8IUH5 632 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ADGRG2Q8IZP9 1017 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 MYO1HQ8N1T3 1032 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 PLD5Q8N7P1 536 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 ZNF781Q8N8C0 355 aa6.53□□□□□ -1.36
USP28-202ENST00000535607 IL31RAQ8NI17 732 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms