RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PLAC1Q9HBJ0 212 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 A0A1W2PNU3 283 aaPredicted RBP22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 F8W8V4 182 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 NDC80O14777 642 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 HOXB3P14651 431 aaPredicted RBP22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 RPS3P23396 243 aaKnown RBP eCLIP22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 PDHA2P29803 388 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 PREPP48147 710 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 INHBCP55103 352 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 ARL4CP56559 192 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 TUBB2AQ13885 445 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 CRYMQ14894 314 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 HIF1AQ16665 826 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 LONRF1Q17RB8 773 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 MAP9Q49MG5 647 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 ZNF574Q6ZN55 896 aaPredicted RBP22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 CENPUQ71F23 418 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 PIM3Q86V86 326 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 LRRC6Q86X45 466 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 SLITRK4Q8IW52 837 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 OR10G6Q8NH81 332 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 ELMO1Q92556 727 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 LPGAT1Q92604 370 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 C12orf66Q96MD2 445 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 TMEM74Q96NL1 305 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 NAT9Q9BTE0 207 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 TUBB2BQ9BVA1 445 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 NRSN2Q9GZP1 204 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 C20orf96Q9NUD7 363 aaPredicted RBP22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 IMP3Q9NV31 184 aaKnown RBP22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 GRHL1Q9NZI5 618 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 WHRNQ9P202 907 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 FRYQ5TBA9 3013 aa22.22■■□□□ 1.15
SFSWAP-204ENST00000535399 SLC5A10A0PJK1 596 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 IQCF5A8MTL0 148 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 LIN7AO14910 233 aaPredicted RBP22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 TTC4O95801 387 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 ITGB6P18564 788 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 CCKBRP32239 447 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 ELK3P41970 407 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 CBLBQ13191 982 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 THOC5Q13769 683 aaKnown RBP22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 GPR18Q14330 331 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 RNF187Q5TA31 235 aaPredicted RBP22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 ZNF470Q6ECI4 717 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 DUS1LQ6P1R4 473 aaKnown RBP22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 NAPRTQ6XQN6 538 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 UNC5BQ8IZJ1 945 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 KIF18AQ8NI77 898 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 LRRC39Q96DD0 335 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 CARD6Q9BX69 1037 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 SEMA6CQ9H3T2 930 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 OGFRQ9NZT2 677 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 GNPTGQ9UJJ9 305 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 TEX264Q9Y6I9 313 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 UNC13CQ8NB66 2214 aa22.21■■□□□ 1.15
SFSWAP-204ENST00000535399 TMX2-CTNND1H3BSU7 103 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 DUX1O43812 170 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 CAPNS1P04632 268 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 CCR7P32248 378 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 RTP5Q14D33 572 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 ZNF789Q5FWF6 425 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 SPANXN3Q5MJ09 141 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 CTSL3PQ5NE16 218 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 HP1BP3Q5SSJ5 553 aaPredicted RBP22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 PTRHD1Q6GMV3 140 aaKnown RBP22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 KRT222Q8N1A0 295 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 AHCYL2Q96HN2 611 aaKnown RBP22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 CNTNAP3BQ96NU0 1288 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 BIRC8Q96P09 236 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 DPYSL5Q9BPU6 564 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 CNTNAP3Q9BZ76 1288 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 EPB41L1Q9H4G0 881 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 EPB41L5Q9HCM4 733 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 TMEM9Q9P0T7 183 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 CHMP2BQ9UQN3 213 aa22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 UTP11Q9Y3A2 253 aaKnown RBP22.2■■□□□ 1.14
SFSWAP-204ENST00000535399 ASPMQ8IZT6 3477 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 IGF2RP11717 2491 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 UBA6A0AVT1 1052 aaPredicted RBP22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 E7ESA3 106 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 S1PR4O95977 384 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 MAPK9P45984 424 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 CD151P48509 253 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 ADARP55265 1226 aaKnown RBP22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 EIF3BP55884 814 aaKnown RBP22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 CALCOCO2Q13137 446 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 BOP1Q14137 746 aaKnown RBP22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 BRD3Q15059 726 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 ZNF449Q6P9G9 518 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 DENND6AQ8IWF6 608 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 OR4D9Q8NGE8 314 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 NXPE2Q96DL1 559 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 LIN37Q96GY3 246 aaPredicted RBP22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 TSSK1BQ9BXA7 367 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 RAB17Q9H0T7 212 aa22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 INTS10Q9NVR2 710 aaKnown RBP22.19■■□□□ 1.14
SFSWAP-204ENST00000535399 IGHV5-10-1A0A0J9YXX1 117 aa22.18■■□□□ 1.14
SFSWAP-204ENST00000535399 BHMG1C9JSJ3 638 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms