RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TCP1P17987 556 aaKnown RBP15.03■□□□□ -0
CPSF1-210ENST00000532935 MGAT1P26572 445 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 MAGEA6P43360 314 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 FNTAP49354 379 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 GFERP55789 205 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 GNG11P61952 73 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 ZNF658BQ4V348 819 aaPredicted RBP15.03■□□□□ -0
CPSF1-210ENST00000532935 LYPLAL1Q5VWZ2 237 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 ARHGAP22Q7Z5H3 698 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 SPACA3Q8IXA5 215 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
CPSF1-210ENST00000532935 GRK7Q8WTQ7 553 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 USP7Q93009 1102 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 SGSM3Q96HU1 749 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 RMDN2Q96LZ7 410 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 C12orf66Q96MD2 445 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 TTC1Q99614 292 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 DPH1Q9BZG8 443 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 COG4Q9H9E3 785 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 LHX6Q9UPM6 363 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 PRSS21Q9Y6M0 314 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 LOC400499M0QZD8 3231 aa15.03■□□□□ -0
CPSF1-210ENST00000532935 C9orf172C9J069 976 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 QSOX1O00391 747 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 PRAMEF10O60809 474 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 C9P02748 559 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 GSTM1P09488 218 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 FGF3P11487 239 aaPredicted RBP15.02■□□□□ -0
CPSF1-210ENST00000532935 CAPZBP47756 277 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 SARNPP82979 210 aaKnown RBP15.02■□□□□ -0
CPSF1-210ENST00000532935 GSTM4Q03013 218 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 TLE3Q04726 772 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 FASTKD1Q53R41 847 aaKnown RBP15.02■□□□□ -0
CPSF1-210ENST00000532935 ANKRD22Q5VYY1 191 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 CAPRIN2Q6IMN6 1127 aaKnown RBP15.02■□□□□ -0
CPSF1-210ENST00000532935 DUS1LQ6P1R4 473 aaKnown RBP15.02■□□□□ -0
CPSF1-210ENST00000532935 CERS6Q6ZMG9 384 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 CPT1BQ92523 772 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 RSC1A1Q92681 617 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 MRM3Q9HC36 420 aaKnown RBP15.02■□□□□ -0
CPSF1-210ENST00000532935 TREX1Q9NSU2 369 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 SYBUQ9NX95 663 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 KLHL3Q9UH77 587 aa15.02■□□□□ -0
CPSF1-210ENST00000532935 MGAQ8IWI9 3026 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 EFCAB7A8K855 629 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 CAPN5O15484 640 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-210ENST00000532935 KLK10O43240 276 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 OR1I1O60431 355 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 TMEM63AO94886 807 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 NMBRP28336 390 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 SEMA3AQ14563 771 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 PLCL1Q15111 1095 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 TMEM164Q5U3C3 297 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 PAPD7Q5XG87 772 aaKnown RBP15.01□□□□□ -0.01
CPSF1-210ENST00000532935 CAND1Q86VP6 1230 aaKnown RBP15.01□□□□□ -0.01
CPSF1-210ENST00000532935 FAM129CQ86XR2 697 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 JPH3Q8WXH2 748 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-210ENST00000532935 CRELD1Q96HD1 420 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 C9orf72Q96LT7 481 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 TGM7Q96PF1 710 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 TAAR9Q96RI9 348 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 KIFC1Q9BW19 673 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 B3GNT4Q9C0J1 378 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 OR52A5Q9H2C5 316 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 CATSPERZQ9NTU4 200 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 OCIAD1Q9NX40 245 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 FOXJ2Q9P0K8 574 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 ACSL6Q9UKU0 697 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 SOX13Q9UN79 622 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 HEBP2Q9Y5Z4 205 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 IGSF10Q6WRI0 2623 aa15.01□□□□□ -0.01
CPSF1-210ENST00000532935 B4E171 279 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 AVILO75366 819 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 FTH1P02794 183 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 TUBB4AP04350 444 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 ANKRD34CP0C6C1 535 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 OR56A5P0C7T3 313 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 PDHA2P29803 388 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 PPARGP37231 505 aaPredicted RBP15□□□□□ -0.01
CPSF1-210ENST00000532935 TSPAN7P41732 249 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 PREPP48147 710 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 LEPRP48357 1165 aaKnown RBP15□□□□□ -0.01
CPSF1-210ENST00000532935 RPA4Q13156 261 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 AARS2Q5JTZ9 985 aaKnown RBP15□□□□□ -0.01
CPSF1-210ENST00000532935 ZNF449Q6P9G9 518 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 KLHL35Q6PF15 583 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 BMPERQ8N8U9 685 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 ZFPM2Q8WW38 1151 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 ART4Q93070 314 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 PMEPA1Q969W9 287 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 MFSD3Q96ES6 412 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 NAPGQ99747 312 aaPredicted RBP15□□□□□ -0.01
CPSF1-210ENST00000532935 RAB33BQ9H082 229 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 KIR3DX1Q9H7L2 352 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 SLC39A1Q9NY26 324 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 MARCH4Q9P2E8 410 aaPredicted RBP15□□□□□ -0.01
CPSF1-210ENST00000532935 EPHA6Q9UF33 1036 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 SLC24A2Q9UI40 661 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 ANAPC5Q9UJX4 755 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 PCDHGA3Q9Y5H0 932 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms