RNA–Protein interactions for RNA: ENST00000532171.5

CAPN11-204, Transcript of calpain 11, human

TSL 4

Gene CAPN11, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN11-204	ENST00000532171	C12orf66	Q96MD2	445 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	FCRL3	Q96P31	734 aa	Predicted RBP	11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	INSM2	Q96T92	566 aa	Predicted RBP	11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	DPYSL5	Q9BPU6	564 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	TBC1D10A	Q9BXI6	508 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	TRIM31	Q9BZY9	425 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	STRADB	Q9C0K7	418 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	ZMYND15	Q9H091	742 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	OR52A5	Q9H2C5	316 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	EPB41L1	Q9H4G0	881 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	CCDC86	Q9H6F5	360 aa	Known RBP	11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	EPB41L5	Q9HCM4	733 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	DKK4	Q9UBT3	224 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	CDC23	Q9UJX2	597 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	PIKFYVE	Q9Y2I7	2098 aa		11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	CFAP20	Q9Y6A4	193 aa	Known RBP	11.22	□□□□□ -0.61
CAPN11-204	ENST00000532171	LIN7A	O14910	233 aa	Predicted RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	TP73	O15350	636 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	RAD51C	O43502	376 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	BRINP1	O60477	761 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	NDUFS3	O75489	264 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	BANF1	O75531	89 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	URI1	O94763	535 aa	Predicted RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	MPO	P05164	745 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	POLB	P06746	335 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	THRA	P10827	490 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	HOXB3	P14651	431 aa	Predicted RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	PGAM1	P18669	254 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	MAPK9	P45984	424 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	RPL21	P46778	160 aa	Known RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	PREP	P48147	710 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	PPM1F	P49593	454 aa	Predicted RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	ITGA8	P53708	1063 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	MRPS25	P82663	173 aa	Known RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	CYP4F3	Q08477	520 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	EIF3I	Q13347	325 aa	Known RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	BOP1	Q14137	746 aa	Known RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	BBS9	Q3SYG4	887 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	MSS51	Q4VC12	460 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	SYTL3	Q4VX76	610 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	PHF19	Q5T6S3	580 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	RNF187	Q5TA31	235 aa	Predicted RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	ZNF470	Q6ECI4	717 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	NEPRO	Q6NW34	567 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	MAATS1	Q7Z4T9	603 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	LRRC6	Q86X45	466 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	PDIK1L	Q8N165	341 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	OR4D9	Q8NGE8	314 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	WDR36	Q8NI36	951 aa	Known RBP	11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	LKAAEAR1	Q8TD35	194 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	ELMO1	Q92556	727 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	CCDC74B	Q96LY2	380 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	TSSK1B	Q9BXA7	367 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	P2RY12	Q9H244	342 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	SEMA6C	Q9H3T2	930 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	POLR1B	Q9H9Y6	1135 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	IL1RAPL1	Q9NZN1	696 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	TMEM9	Q9P0T7	183 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	GNPTG	Q9UJJ9	305 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	SATB2	Q9UPW6	733 aa		11.21	□□□□□ -0.61
CAPN11-204	ENST00000532171	ACACA	Q13085	2346 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	MN1	Q10571	1320 aa	Predicted RBP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	IGHV5-10-1	A0A0J9YXX1	117 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	UBA6	A0AVT1	1052 aa	Predicted RBP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	PMS2P1	A4D2B8	440 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	KIF2A	O00139	706 aa	Predicted RBP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	IFRD1	O00458	451 aa	Predicted RBP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	NDC80	O14777	642 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	PFDN6	O15212	129 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	DXO	O77932	396 aa	Known RBP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	UBXN7	O94888	489 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	TUBB4A	P04350	444 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	ITGB6	P18564	788 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	RPS3	P23396	243 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	PDHA2	P29803	388 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	CAPZB	P47756	277 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	LSS	P48449	732 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	CD151	P48509	253 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	LIMK2	P53671	638 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	CRYM	Q14894	314 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	HIF1A	Q16665	826 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	LONRF1	Q17RB8	773 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	WHAMMP3	Q1A5X7	153 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	TMEM71	Q6P5X7	295 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	ZNF449	Q6P9G9	518 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	WDR74	Q6RFH5	385 aa	Predicted RBP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	IGF2-AS	Q6U949	168 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	RAB11FIP2	Q7L804	512 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	PDZD3	Q86UT5	571 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	CILP2	Q8IUL8	1156 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	NCSTN	Q92542	709 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	LPGAT1	Q92604	370 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	ZNF592	Q92610	1267 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	RSC1A1	Q92681	617 aa		11.2	□□□□□ -0.62
CAPN11-204	ENST00000532171	TMEM159	Q96B96	161 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms