RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 FANCGO15287 622 aa8□□□□□ -1.13
CD44-232ENST00000531118 DDX3YO15523 660 aaKnown RBP8□□□□□ -1.13
CD44-232ENST00000531118 LDB2O43679 373 aa8□□□□□ -1.13
CD44-232ENST00000531118 KLF7O75840 302 aaPredicted RBP8□□□□□ -1.13
CD44-232ENST00000531118 LCA5LO95447 670 aa8□□□□□ -1.13
CD44-232ENST00000531118 ZBTB11O95625 1053 aaPredicted RBP8□□□□□ -1.13
CD44-232ENST00000531118 TRBC1P01850 177 aa8□□□□□ -1.13
CD44-232ENST00000531118 CYP2A7P20853 494 aa8□□□□□ -1.13
CD44-232ENST00000531118 AGAP20933 346 aa8□□□□□ -1.13
CD44-232ENST00000531118 GPD1P21695 349 aa8□□□□□ -1.13
CD44-232ENST00000531118 PON1P27169 355 aa8□□□□□ -1.13
CD44-232ENST00000531118 RPL10P27635 214 aaKnown RBP8□□□□□ -1.13
CD44-232ENST00000531118 HADHAP40939 763 aa8□□□□□ -1.13
CD44-232ENST00000531118 PPP1R2P41236 205 aa8□□□□□ -1.13
CD44-232ENST00000531118 FOLR3P41439 243 aa8□□□□□ -1.13
CD44-232ENST00000531118 DRG2P55039 364 aaKnown RBP8□□□□□ -1.13
CD44-232ENST00000531118 STX17P56962 302 aa8□□□□□ -1.13
CD44-232ENST00000531118 BPIFB4P59827 614 aa8□□□□□ -1.13
CD44-232ENST00000531118 MAXP61244 160 aa8□□□□□ -1.13
CD44-232ENST00000531118 PRKD1Q15139 912 aaPredicted RBP8□□□□□ -1.13
CD44-232ENST00000531118 ASIC2Q16515 512 aa8□□□□□ -1.13
CD44-232ENST00000531118 CYP2A13Q16696 494 aa8□□□□□ -1.13
CD44-232ENST00000531118 ZNF569Q5MCW4 686 aa8□□□□□ -1.13
CD44-232ENST00000531118 TMTC4Q5T4D3 741 aa8□□□□□ -1.13
CD44-232ENST00000531118 ZNF648Q5T619 568 aaPredicted RBP8□□□□□ -1.13
CD44-232ENST00000531118 PLEKHA7Q6IQ23 1121 aa8□□□□□ -1.13
CD44-232ENST00000531118 SCYL2Q6P3W7 929 aa8□□□□□ -1.13
CD44-232ENST00000531118 XKRXQ6PP77 449 aa8□□□□□ -1.13
CD44-232ENST00000531118 GFRALQ6UXV0 394 aa8□□□□□ -1.13
CD44-232ENST00000531118 TAOK1Q7L7X3 1001 aa8□□□□□ -1.13
CD44-232ENST00000531118 PPP1R32Q7Z5V6 425 aa8□□□□□ -1.13
CD44-232ENST00000531118 NOP9Q86U38 636 aaKnown RBP8□□□□□ -1.13
CD44-232ENST00000531118 ACBD4Q8NC06 268 aa8□□□□□ -1.13
CD44-232ENST00000531118 OR1L3Q8NH93 324 aa8□□□□□ -1.13
CD44-232ENST00000531118 DNAJB14Q8TBM8 379 aa8□□□□□ -1.13
CD44-232ENST00000531118 SMARCE1Q969G3 411 aa8□□□□□ -1.13
CD44-232ENST00000531118 HSH2DQ96JZ2 352 aa8□□□□□ -1.13
CD44-232ENST00000531118 MAGEB10Q96LZ2 347 aaPredicted RBP8□□□□□ -1.13
CD44-232ENST00000531118 ZNF599Q96NL3 588 aa8□□□□□ -1.13
CD44-232ENST00000531118 SPOCK3Q9BQ16 436 aa8□□□□□ -1.13
CD44-232ENST00000531118 EPS8L2Q9H6S3 715 aa8□□□□□ -1.13
CD44-232ENST00000531118 FAM207AQ9NSI2 230 aaPredicted RBP8□□□□□ -1.13
CD44-232ENST00000531118 GPATCH2LQ9NWQ4 482 aa8□□□□□ -1.13
CD44-232ENST00000531118 DNPEPQ9ULA0 475 aa8□□□□□ -1.13
CD44-232ENST00000531118 PTRH2Q9Y3E5 179 aaKnown RBP8□□□□□ -1.13
CD44-232ENST00000531118 SNRNP200O75643 2136 aaKnown RBP8□□□□□ -1.13
CD44-232ENST00000531118 CCDC78A2IDD5 438 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 GTPBP10A4D1E9 387 aaKnown RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 GPR89AB7ZAQ6 455 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 EEF2KO00418 725 aaKnown RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 CHUKO15111 745 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 FZD6O60353 706 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 ALOX12BO75342 701 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 SMC2O95347 1197 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 CLDN14O95500 239 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 MMEP08473 750 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 PDHA1P08559 390 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 GPR89BP0CG08 455 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 ZNF7P17097 686 aaPredicted RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 KLK2P20151 261 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 MX2P20592 715 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 MMP8P22894 467 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 IL4RP24394 825 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 ARCN1P48444 511 aaKnown RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 AIF1P55008 147 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 GSCP56915 257 aaPredicted RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 PPP2R2AP63151 447 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 KRT85P78386 507 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 TNP2Q05952 138 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 AIMP2Q13155 320 aaKnown RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 SSPNQ14714 243 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 PLCL1Q15111 1095 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 INAQ16352 499 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 RALGPS1Q5JS13 557 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 COX20Q5RI15 118 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 ZFYVE27Q5T4F4 411 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 AGAP9Q5VTM2 703 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 RPUSD3Q6P087 351 aaKnown RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 KLHL35Q6PF15 583 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 FBXO38Q6PIJ6 1188 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 ABRAXAS1Q6UWZ7 409 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 WASH2PQ6VEQ5 465 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 LRRTM4Q86VH4 590 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 OOSP2Q86WS3 158 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 RAVER1Q8IY67 606 aaKnown RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 CHDHQ8NE62 594 aaPredicted RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 PPM1MQ96MI6 270 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 DPH2Q9BQC3 489 aaPredicted RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 CXXC4Q9H2H0 198 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 SLC6A20Q9NP91 592 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 DLL4Q9NR61 685 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 SEMA3GQ9NS98 782 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 AP4E1Q9UPM8 1137 aa7.99□□□□□ -1.13
CD44-232ENST00000531118 MAP1AP78559 2803 aaPredicted RBP7.99□□□□□ -1.13
CD44-232ENST00000531118 HCFC1P51610 2035 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 KMOO15229 486 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 CNOT3O75175 753 aaKnown RBP7.98□□□□□ -1.13
CD44-232ENST00000531118 UNC5CO95185 931 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 CLDN7O95471 211 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 PEX11BO96011 259 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 296.9 ms