RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 CAPGP40121 348 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 MAGEA11P43364 429 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 CDH4P55283 916 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 DCTN2Q13561 401 aaKnown RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 AARS2Q5JTZ9 985 aaKnown RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SPANXN4Q5MJ08 99 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 TMTC4Q5T4D3 741 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 GCNT7Q6ZNI0 430 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 DET1Q7L5Y6 550 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 ADGRG2Q8IZP9 1017 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 LRRC43Q8N309 656 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 ITFG1Q8TB96 612 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 MYLIPQ8WY64 445 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SEPT8Q92599 483 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 NCLNQ969V3 563 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SEZ6LQ9BYH1 1024 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 TRIM54Q9BYV2 358 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 ASB8Q9H765 288 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 IFT80Q9P2H3 777 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 ABT1Q9ULW3 272 aaKnown RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 FAM92AA1XBS5 289 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ZNF840PA6NDX5 716 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 H0Y858 1186 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 J3QRK9 145 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 SYN3O14994 580 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 TAPBPO15533 448 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 FFAR2O15552 330 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 PRAMEF1O95521 474 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ZBTB11O95625 1053 aaPredicted RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 MLYCDO95822 493 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 PRR35P0CG20 571 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 MTHFRP42898 656 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 TTPAP49638 278 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CLCN7P51798 805 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 MRPL58Q14197 206 aaKnown RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CPSF6Q16630 551 aaKnown RBP eCLIP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 INTS11Q5TA45 600 aaKnown RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CXorf57Q6NSI4 855 aaKnown RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ABRAXAS1Q6UWZ7 409 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 SPRED1Q7Z699 444 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ZFAND4Q86XD8 727 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ERI1Q8IV48 349 aaKnown RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 APCDD1Q8J025 514 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 TTC30BQ8N4P2 665 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 MFSD2AQ8NA29 543 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 PYCR2Q96C36 320 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 FBXL8Q96CD0 374 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 GLT1D1Q96MS3 346 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CASD1Q96PB1 797 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CGREF1Q99674 301 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 FANCEQ9HB96 536 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 LATS2Q9NRM7 1088 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 RIC8BQ9NVN3 520 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CLEC4EQ9ULY5 219 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 PADI4Q9UM07 663 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 PKP3Q9Y446 797 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 COL4A4P53420 1690 aaPredicted RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 FAM234BA2RU67 622 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 FAM155AB1AL88 458 aaPredicted RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 H0YJX3 145 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 GNGT2O14610 69 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 SEC22BO75396 215 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ALBP02768 609 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ZNF182P17025 639 aaPredicted RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 MATN1P21941 496 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CA8P35219 290 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ARHGEF7Q14155 803 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 HECTD3Q5T447 861 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 SBSNQ6UWP8 590 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 TPGS1Q6ZTW0 290 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 DEFB128Q7Z7B8 93 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 TSPAN33Q86UF1 283 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 HID1Q8IV36 788 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 HM13Q8TCT9 377 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 MYOCQ99972 504 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 TTPALQ9BTX7 342 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 PAIP1Q9H074 479 aaKnown RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ING2Q9H160 280 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ANKRD36A6QL64 1941 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 C1orf232A0A0U1RR37 186 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 OR6C75A6NL08 312 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 PTGES3LE9PB15 166 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 H3BMQ9 156 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 LSM1O15116 133 aaKnown RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 BMP10O95393 424 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 GPIP06744 558 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 GALTP07902 379 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 MYCLP1P12525 358 aaPredicted RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 AGXTP21549 392 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CSKP41240 450 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 TPD52P55327 224 aaPredicted RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 CCL23P55773 120 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ZXDBP98169 803 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 EMX2Q04743 252 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 RING1Q06587 406 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 IRF5Q13568 498 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 SF1Q15637 639 aaKnown RBP7.33□□□□□ -1.24
C11orf54-207ENST00000528288 ADRM1Q16186 407 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 MEP1AQ16819 746 aa7.33□□□□□ -1.24
C11orf54-207ENST00000528288 TBC1D25Q3MII6 688 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms