RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 XRCC1P18887 633 aaPredicted RBP10.31□□□□□ -0.76
CPSF1-203ENST00000527916 CETN2P41208 172 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 MARCKSL1P49006 195 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 GEMP55040 296 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 GFERP55789 205 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 RWDD2BP57060 319 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 SH3BP2P78314 561 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 PDE1BQ01064 536 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 TMEM115Q12893 351 aaPredicted RBP10.31□□□□□ -0.76
CPSF1-203ENST00000527916 LLGL1Q15334 1064 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 SIRPB2Q5JXA9 342 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 FAM182AQ5T1J6 154 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 ALS2CLQ60I27 953 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 SLC6A19Q695T7 634 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 ABRAXAS1Q6UWZ7 409 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 WASH2PQ6VEQ5 465 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 LRRTM4Q86VH4 590 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 IQCKQ8N0W5 287 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 TTC30BQ8N4P2 665 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 Q8NA96 180 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 OXNAD1Q96HP4 312 aaPredicted RBP10.31□□□□□ -0.76
CPSF1-203ENST00000527916 C19orf43Q9BQ61 176 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 TIMM29Q9BSF4 260 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 HEMGNQ9BXL5 484 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 OSBPL8Q9BZF1 889 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 OR2AG1Q9H205 316 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 IL26Q9NPH9 171 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 WASH6PQ9NQA3 447 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 KLC4Q9NSK0 619 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 TMPRSS11EQ9UL52 423 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 ENTPD4Q9Y227 616 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 KCNK6Q9Y257 313 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 AAR2Q9Y312 384 aaKnown RBP10.31□□□□□ -0.76
CPSF1-203ENST00000527916 REXO2Q9Y3B8 237 aaKnown RBP10.31□□□□□ -0.76
CPSF1-203ENST00000527916 DNMT3AQ9Y6K1 912 aaPredicted RBP10.31□□□□□ -0.76
CPSF1-203ENST00000527916 DUSP10Q9Y6W6 482 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 NF1P21359 2839 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 ANKUB1A6NFN9 424 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 H7C0C1 242 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 TJP3O95049 919 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 CBX6O95503 412 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 TYRP1P17643 537 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 RBL1P28749 1068 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 GRNP28799 593 aaKnown RBP10.3□□□□□ -0.76
CPSF1-203ENST00000527916 SPAM1P38567 509 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 ATP5OP48047 213 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 VAV2P52735 878 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 NAP1L1P55209 391 aaKnown RBP10.3□□□□□ -0.76
CPSF1-203ENST00000527916 UBE2IP63279 158 aaKnown RBP10.3□□□□□ -0.76
CPSF1-203ENST00000527916 ATP13A5Q4VNC0 1218 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 LDLRAP1Q5SW96 308 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF648Q5T619 568 aaPredicted RBP10.3□□□□□ -0.76
CPSF1-203ENST00000527916 ITPRIPL1Q6GPH6 555 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 RANBP10Q6VN20 620 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 RAD9BQ6WBX8 426 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 PRSS42Q7Z5A4 293 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 BPHLQ86WA6 291 aaPredicted RBP10.3□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF547Q8IVP9 402 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 TRIM48Q8IWZ4 208 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 LRRC57Q8N9N7 239 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 ACTL9Q8TC94 416 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 UBE2Q2Q8WVN8 375 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 HAUS1Q96CS2 278 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 ZDHHC12Q96GR4 267 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 FCRL4Q96PJ5 515 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 PPP1R2P1Q96PQ5 205 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 LACRTQ9GZZ8 138 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 GBA3Q9H227 469 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 IMPACTQ9P2X3 320 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 SLC23A2Q9UGH3 650 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 RSPH14Q9UHP6 348 aa10.3□□□□□ -0.76
CPSF1-203ENST00000527916 ARHGAP10A1A4S6 786 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 C5orf60A6NFR6 353 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 KRT86O43790 486 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 CEACAM4O75871 244 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 VIPP01282 170 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 RBP3P10745 1247 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 VCLP18206 1134 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 LPOP22079 712 aaPredicted RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 IDSP22304 550 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 ADRA1AP35348 466 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 CHRNA4P43681 627 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 PER3P56645 1201 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 OTUD4Q01804 1114 aaKnown RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 DMPKQ09013 629 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 ITGA9Q13797 1035 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 PRPSAP1Q14558 356 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 INSCQ1MX18 579 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 KHDC1Q4VXA5 237 aaKnown RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 ANKRD20A2Q5SQ80 823 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 CCDC181Q5TID7 509 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 ANKRD20A1Q5TYW2 823 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 AGAP9Q5VTM2 703 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 CACHD1Q5VU97 1274 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 ANKRD20A3Q5VUR7 823 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 TMEM26Q6ZUK4 368 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 GLT6D1Q7Z4J2 308 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 C11orf96Q7Z7L8 435 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 GAS2L3Q86XJ1 694 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms