RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CARFQ8N187 725 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 NXPE1Q8N323 547 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 FAM71DQ8N9W8 422 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 OR13C4Q8NGS5 318 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 SLC35B2Q8TB61 432 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 SLC41A2Q96JW4 573 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 OR6C1Q96RD1 312 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 INSM2Q96T92 566 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-207ENST00000527189 COPS8Q99627 209 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 FAM118BQ9BPY3 351 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 FRMD8P1Q9BZ68 369 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-207ENST00000527189 IGSF5Q9NSI5 407 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 PSMD13Q9UNM6 376 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 HEBP2Q9Y5Z4 205 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 RELNP78509 3460 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 IGLV3-16A0A075B6K0 115 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 LOC101059948A0A1B0GTJ6 334 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 ERI2A8K979 691 aaKnown RBP13.09□□□□□ -0.31
CAPN1-207ENST00000527189 SGTAO43765 313 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 MT-ND3P03897 115 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 SLC35G4P0C7Q5 338 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 ITGB6P18564 788 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 STAT5AP42229 794 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 PRLHRP49683 370 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 SEPHS1P49903 392 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 OLIG2Q13516 323 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 SPTAN1Q13813 2472 aaKnown RBP13.09□□□□□ -0.31
CAPN1-207ENST00000527189 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
CAPN1-207ENST00000527189 CAPRIN2Q6IMN6 1127 aaKnown RBP13.09□□□□□ -0.31
CAPN1-207ENST00000527189 C6orf15Q6UXA7 325 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-207ENST00000527189 FAM92BQ6ZTR7 304 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 DET1Q7L5Y6 550 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 LINC00523Q86TU6 105 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 PPP1R3BQ86XI6 285 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 CFAP206Q8IYR0 622 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 GPR150Q8NGU9 434 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 HM13Q8TCT9 377 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 STYXQ8WUJ0 223 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 ULBP3Q9BZM4 244 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 FAM117AQ9C073 453 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 WWP1Q9H0M0 922 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 KIR3DX1Q9H7L2 352 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 VPS37BQ9H9H4 285 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 PDE7BQ9NP56 450 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 IMP3Q9NV31 184 aaKnown RBP13.09□□□□□ -0.31
CAPN1-207ENST00000527189 NLE1Q9NVX2 485 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-207ENST00000527189 ZDHHC3Q9NYG2 299 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 TUBD1Q9UJT1 453 aa13.09□□□□□ -0.31
CAPN1-207ENST00000527189 ZNF106Q9H2Y7 1883 aaKnown RBP13.08□□□□□ -0.32
CAPN1-207ENST00000527189 TRBV5-4A0A0C4DH59 114 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 OR5K3A6NET4 321 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 GOLGA6L6A8MZA4 724 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 KIF1CO43896 1103 aaKnown RBP13.08□□□□□ -0.32
CAPN1-207ENST00000527189 METTL18O95568 372 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 AP2A1O95782 977 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 FTCDO95954 541 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 RECKO95980 971 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 FAM87AP0C7U9 286 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 CCNYL3P0C7X3 344 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 PSMA3P25788 255 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 PBLDP30039 288 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-207ENST00000527189 MC4RP32245 332 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 CCR10P46092 362 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 SH3BP2P78314 561 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 ACY1Q03154 408 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 LAMB3Q13751 1172 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 PLCL1Q15111 1095 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 ZNF449Q6P9G9 518 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 OOSP2Q86WS3 158 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 RASGRP3Q8IV61 690 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 SIDT2Q8NBJ9 832 aaKnown RBP13.08□□□□□ -0.32
CAPN1-207ENST00000527189 C12orf66Q96MD2 445 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 TMEM121Q9BTD3 319 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 TSGA10Q9BZW7 698 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 SLC25A18Q9H1K4 315 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 HRASLS2Q9NWW9 162 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 SLC24A2Q9UI40 661 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 KCND3Q9UK17 655 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-207ENST00000527189 RPS6KL1Q9Y6S9 549 aa13.08□□□□□ -0.32
CAPN1-207ENST00000527189 IGHV5-51A0A0C4DH38 117 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 TLCD2A6NGC4 264 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 MATN2O00339 956 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 QSOX1O00391 747 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 KRT86O43790 486 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 SPAG6O75602 509 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 ACRV1P26436 265 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 CD151P48509 253 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 HSD11B2P80365 405 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 TMPRSS15P98073 1019 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 CACNG1Q06432 222 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 NFATC3Q12968 1075 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 RPA4Q13156 261 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 KRT33BQ14525 404 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 SKIDA1Q1XH10 827 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 DNTTIP2Q5QJE6 756 aaKnown RBP13.07□□□□□ -0.32
CAPN1-207ENST00000527189 ARMC6Q6NXE6 501 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 OR8K5Q8NH50 307 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms