RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TTC4O95801 387 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 VIPP01282 170 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 C1QAP02745 245 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 FTH1P02794 183 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 RPLP0P05388 317 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC35G4P0C7Q5 338 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 OR56A5P0C7T3 313 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 ATXN8OSP0DMR3 200 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CKMT1AP12532 417 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CEACAM1P13688 526 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 F3P13726 295 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 PKMP14618 531 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 HOXB3P14651 431 aaPredicted RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 VCLP18206 1134 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 OGNP20774 298 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CSRP1P21291 193 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 IDSP22304 550 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 MCM3P25205 808 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 BDKRB1P46663 353 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 TTPAP49638 278 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 PPP1CAP62136 330 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 TIAL1Q01085 375 aaKnown RBP eCLIP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 HHEXQ03014 270 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CAV1Q03135 178 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 LRP8Q14114 963 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 GPR18Q14330 331 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 KRT33BQ14525 404 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 PUM1Q14671 1186 aaKnown RBP eCLIP4.5□□□□□ -1.697e-11■□□□□ 10
CHMP4A-202ENST00000524955 INAVAQ3KP66 663 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CCSMST1Q4G0I0 132 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF658BQ4V348 819 aaPredicted RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 GLE1Q53GS7 698 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 ACSBG2Q5FVE4 666 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 AARS2Q5JTZ9 985 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 LYPLAL1Q5VWZ2 237 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 METRNLQ641Q3 311 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 FOXR1Q6PIV2 292 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 OGFOD3Q6PK18 319 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 ABRAXAS1Q6UWZ7 409 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 PACS1Q6VY07 963 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CERS6Q6ZMG9 384 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 PIWIL4Q7Z3Z4 852 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF438Q7Z4V0 828 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 B3GNT8Q7Z7M8 397 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 TAX1BP1Q86VP1 789 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CCNJLQ8IV13 435 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 TRIM48Q8IWZ4 208 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM20CQ8IXL6 584 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CPNE9Q8IYJ1 553 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 SFRP1Q8N474 314 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 C2CD4AQ8NCU7 369 aaPredicted RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 HM13Q8TCT9 377 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 DTX3LQ8TDB6 740 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 NCSTNQ92542 709 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 RSC1A1Q92681 617 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 PEX13Q92968 403 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 LRRC39Q96DD0 335 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CXorf40BQ96DE9 158 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 PPM1MQ96MI6 270 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 IL17FQ96PD4 163 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 TTC1Q99614 292 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 GPR21Q99679 349 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CDC6Q99741 560 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 NUDT22Q9BRQ3 303 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 TIMM29Q9BSF4 260 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM167BQ9BTA0 163 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 DUSP23Q9BVJ7 150 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 FOXP3Q9BZS1 431 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 KLHL25Q9H0H3 589 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 ABCG4Q9H172 646 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 OR52A5Q9H2C5 316 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 ABCF3Q9NUQ8 709 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 KCNK4Q9NYG8 393 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 MOCS1Q9NZB8 636 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 ZFATQ9P243 1243 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CPNE7Q9UBL6 633 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 MTRF1LQ9UGC7 380 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 GNPTGQ9UJJ9 305 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 KLK13Q9UKR3 277 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 IKZF3Q9UKT9 509 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 CDYLQ9Y232 598 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 MED16Q9Y2X0 877 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 MTO1Q9Y2Z2 717 aaKnown RBP4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 TRPM6Q9BX84 2022 aa4.5□□□□□ -1.69
CHMP4A-202ENST00000524955 SCN8AQ9UQD0 1980 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 DMDP11532 3685 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM95CA0A1B0GW59 222 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC5A10A0PJK1 596 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 EME2A4GXA9 379 aaPredicted RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 OR6C74A6NCV1 312 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM159BA6NKW6 160 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 GPR89AB7ZAQ6 455 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 NDC80O14777 642 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 EIF3HO15372 352 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 PHGDHO43175 533 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 KIF1CO43896 1103 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 OPA1O60313 960 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SYF2O95926 243 aaKnown RBP4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 SHBGP04278 402 aa4.49□□□□□ -1.69
CHMP4A-202ENST00000524955 GPR89BP0CG08 455 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms