RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 UBE2CO00762 179 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 XRCC3O43542 346 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 DIAPH2O60879 1101 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 TBCAO75347 108 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 PSMD10O75832 226 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 LDLRP01130 860 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 TFAP2AP05549 437 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 FYNP06241 537 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 H1F0P07305 194 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 SNRNP70P08621 437 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 CCDC175P0C221 793 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 LINGO3P0C6S8 592 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 GM2AP17900 193 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 ERCC2P18074 760 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 CPT2P23786 658 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 TKTP29401 623 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 CCKARP32238 428 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 PCGF2P35227 344 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 ARCN1P48444 511 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 RPS18P62269 152 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 RALGDSQ12967 914 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 IL11RAQ14626 422 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 DUOXA1Q1HG43 343 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 CST9LP1Q5W188 147 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 ZNF324BQ6AW86 544 aaPredicted RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 CAPRIN2Q6IMN6 1127 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 KLC3Q6P597 504 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 FIGLAQ6QHK4 219 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 Q75L30 129 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 CCDC186Q7Z3E2 898 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 SATL1Q86VE3 508 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 LONP2Q86WA8 852 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 DCP1BQ8IZD4 617 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 TDRD5Q8NAT2 981 aaKnown RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 POC1AQ8NBT0 407 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 OR6J1Q8NGC5 347 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 CFAP61Q8NHU2 1237 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 LNX1Q8TBB1 728 aaPredicted RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 TAS1R2Q8TE23 839 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 SMPDL3BQ92485 455 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 NXNL1Q96CM4 212 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 LINGO1Q96FE5 620 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 LRRC1Q9BTT6 524 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 WNT5BQ9H1J7 359 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 ERVMER34-1Q9H9K5 563 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 TRPC7Q9HCX4 862 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 OSGIN1Q9UJX0 560 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 DLGAP4Q9Y2H0 992 aa3.76□□□□□ -1.81
SKP1-212ENST00000523966 BAZ1AQ9NRL2 1556 aaPredicted RBP3.76□□□□□ -1.81
SKP1-212ENST00000523966 ZNF541Q9H0D2 1346 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 A0A1W2PS18 150 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 MEIS2O14770 477 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 LDB3O75112 727 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 MED24O75448 989 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 TADA2AO75478 443 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 CAVIN2O95810 425 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 CETPP11597 493 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 EEF1B2P24534 225 aaKnown RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 MTHFRP42898 656 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 HOXA1P49639 335 aaPredicted RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 TROAPQ12815 778 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 COASYQ13057 564 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 TNIP1Q15025 636 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 C9orf57Q5W0N0 161 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 KIAA1161Q6NSJ0 714 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 PRSS57Q6UWY2 283 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 RAD9BQ6WBX8 426 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 ZNF517Q6ZMY9 492 aaPredicted RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 KCTD8Q6ZWB6 473 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 PLPPR4Q7Z2D5 763 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 ARMC9Q7Z3E5 817 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 PTOV1Q86YD1 416 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 MFN1Q8IWA4 741 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 ZBTB8BQ8NAP8 495 aaPredicted RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 MOSPD2Q8NHP6 518 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 ATL1Q8WXF7 558 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 CD101Q93033 1021 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 SLAMF9Q96A28 289 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 VPS33AQ96AX1 596 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 CFAP57Q96MR6 1250 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 SFXN2Q96NB2 322 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 ZNF830Q96NB3 372 aaPredicted RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 RAB3IPQ96QF0 476 aaPredicted RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 SLC22A12Q96S37 553 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 EPYCQ99645 322 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 CSTL1Q9H114 145 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 NOL11Q9H8H0 719 aaKnown RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 DDX31Q9H8H2 851 aaKnown RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 EVA1AQ9H8M9 152 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 EBF2Q9HAK2 575 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 UPF2Q9HAU5 1272 aaKnown RBP3.75□□□□□ -1.81
SKP1-212ENST00000523966 LRRC4Q9HBW1 653 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 EQTNQ9NQ60 294 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 ABCF3Q9NUQ8 709 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 NPAP1Q9NZP6 1156 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 ANAPC5Q9UJX4 755 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 CCL27Q9Y4X3 112 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 RPS6KL1Q9Y6S9 549 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 BICRAQ9NZM4 1560 aa3.75□□□□□ -1.81
SKP1-212ENST00000523966 UNC13AQ9UPW8 1703 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms