RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 KCTD6Q8NC69 237 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 NUDCD2Q8WVJ2 157 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SLC44A1Q8WWI5 657 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SYAP1Q96A49 352 aaPredicted RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 LRRC59Q96AG4 307 aaKnown RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 TMEM19Q96HH6 336 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 CABS1Q96KC9 395 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SEMA3CQ99985 751 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 CRACR2AQ9BSW2 395 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 TEX12Q9BXU0 123 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 DNAI2Q9GZS0 605 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 TMEM39BQ9GZU3 492 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 RABEP2Q9H5N1 569 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 RPAP3Q9H6T3 665 aaPredicted RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 DNAJC18Q9H819 358 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 ARHGEF38Q9NXL2 777 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 UTP6Q9NYH9 597 aaKnown RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 MALT1Q9UDY8 824 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 DBNLQ9UJU6 430 aaKnown RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 PADI1Q9ULC6 663 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 EXO1Q9UQ84 846 aaKnown RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 B3GALT5Q9Y2C3 310 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 PTPRCP08575 1304 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 CNTNAP2Q9UHC6 1331 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 A0A0G2JPF8 293 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 A8MXE2 369 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 HNRNPCL3B7ZW38 293 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 DDX39AO00148 427 aaKnown RBP4.81□□□□□ -1.64
SKP1-211ENST00000523359 SLC28A2O43868 658 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 SYNCRIPO60506 623 aaKnown RBP4.81□□□□□ -1.64
SKP1-211ENST00000523359 STAM2O75886 525 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 OPN1MWP04001 364 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 ATP5BP06576 529 aaKnown RBP4.81□□□□□ -1.64
SKP1-211ENST00000523359 HNRNPCL4P0DMR1 293 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 OPN1MW2P0DN77 364 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 OPN1MW3P0DN78 364 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 GAP43P17677 238 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 PPP5CP53041 499 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 PNLIPRP2P54317 469 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 SLC20A2Q08357 652 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 C17orf67Q0P5P2 114 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 SNTA1Q13424 505 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 SLC39A14Q15043 492 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 SATL1Q86VE3 508 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 EMC1Q8N766 993 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 Q8NFD4 153 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 SLC20A1Q8WUM9 679 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 SLC22A18Q96BI1 424 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 MARK4Q96L34 752 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 DACH2Q96NX9 599 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 AGAP3Q96P47 875 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 QRFPRQ96P65 431 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 TMEM237Q96Q45 408 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 FNBP1Q96RU3 617 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 TEX13BQ9BXU2 312 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 AIPL1Q9NZN9 384 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 MRPL15Q9P015 296 aaKnown RBP4.81□□□□□ -1.64
SKP1-211ENST00000523359 MOSPD1Q9UJG1 213 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 PLAGL1Q9UM63 463 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 AMDHD2Q9Y303 409 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 C2CD2Q9Y426 696 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 CCL27Q9Y4X3 112 aa4.81□□□□□ -1.64
SKP1-211ENST00000523359 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.81□□□□□ -1.64
SKP1-211ENST00000523359 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 GPR75-ASB3A0A0A6YYF3 556 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 TMEM8BA6NDV4 472 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 ZNF587BE7ETH6 402 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 ZBTB43O43298 467 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 TXNL1O43396 289 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 ZBTB14O43829 449 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 KLHL41O60662 606 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 RSL1D1O76021 490 aaKnown RBP4.8□□□□□ -1.64
SKP1-211ENST00000523359 DAOP14920 347 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 MYOD1P15172 320 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 HRH2P25021 359 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 MAPK3P27361 379 aaPredicted RBP4.8□□□□□ -1.64
SKP1-211ENST00000523359 CCKARP32238 428 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 HSD17B4P51659 736 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 TKTL1P51854 596 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 ARFIP1P53367 373 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 SH3BGRP55822 239 aaPredicted RBP4.8□□□□□ -1.64
SKP1-211ENST00000523359 SLC26A5P58743 744 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 POLR2FP61218 127 aaKnown RBP4.8□□□□□ -1.64
SKP1-211ENST00000523359 ISL1P61371 349 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 KLHL30Q0D2K2 578 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 NTRK2Q16620 822 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 MEP1AQ16819 746 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 MYLK3Q32MK0 819 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 ZNF585BQ52M93 769 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 CEP55Q53EZ4 464 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 TCP11X2Q5H9J9 407 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 NADSYN1Q6IA69 706 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 DENND5BQ6ZUT9 1274 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 PIWIL3Q7Z3Z3 882 aaKnown RBP4.8□□□□□ -1.64
SKP1-211ENST00000523359 MAP7D3Q8IWC1 876 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 C1orf87Q8N0U7 546 aa4.8□□□□□ -1.64
SKP1-211ENST00000523359 ZBTB44Q8NCP5 570 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms