RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 ACVR1Q04771 509 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 ZFP36L1Q07352 338 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 DHX34Q14147 1143 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 AARS2Q5JTZ9 985 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 LYPLAL1Q5VWZ2 237 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 METRNLQ641Q3 311 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 IRGCQ6NXR0 463 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 TMEM71Q6P5X7 295 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 ZNF449Q6P9G9 518 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 C19orf48Q6RUI8 117 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 XKR5Q6UX68 686 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 WASH2PQ6VEQ5 465 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 CAND1Q86VP6 1230 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 PPIL6Q8IXY8 311 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 KRT222Q8N1A0 295 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 NAT8LQ8N9F0 302 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 OR4D9Q8NGE8 314 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 LKAAEAR1Q8TD35 194 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 HNRNPLLQ8WVV9 542 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 GRAMD1AQ96CP6 724 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 PRR11Q96HE9 360 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 LINC00615Q96LM1 132 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 KRT12Q99456 494 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 CMKLR1Q99788 373 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 HGH1Q9BTY7 390 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 MRM3Q9HC36 420 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 XAB2Q9HCS7 855 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 ASCL3Q9NQ33 180 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 WASH6PQ9NQA3 447 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 THSD1Q9NS62 852 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 TREX1Q9NSU2 369 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 OGFRQ9NZT2 677 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 ACSL5Q9ULC5 683 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 RIMKLBQ9ULI2 386 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 NEU2Q9Y3R4 380 aa8.18□□□□□ -1.1
CTNNA1-231ENST00000521941 EFCAB7A8K855 629 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 CCDC188H7C350 402 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 QSOX1O00391 747 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 CAPN5O15484 640 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PRAMEF10O60809 474 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 KRT37O76014 449 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 AP2A2O94973 939 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PAMP19021 973 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PSMA3P25788 255 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 ITPKBP27987 946 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PPARGP37231 505 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PTGIRP43119 386 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 CAPZBP47756 277 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 LEPRP48357 1165 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 TTPAP49638 278 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PCBP4P57723 403 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PPP1CAP62136 330 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PRKG2Q13237 762 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 EIF3IQ13347 325 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 BBS9Q3SYG4 887 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 RNASEH2BQ5TBB1 312 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PTRHD1Q6GMV3 140 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 KIAA0930Q6ICG6 404 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PACS1Q6VY07 963 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 CERS6Q6ZMG9 384 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 LRRC69Q6ZNQ3 347 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 FAM92BQ6ZTR7 304 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 LSMEM2Q8N112 164 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PHC3Q8NDX5 983 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 MCUQ8NE86 351 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 ZNF592Q92610 1267 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 FGF11Q92914 225 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PEX13Q92968 403 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 FAM136AQ96C01 138 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PWWP2AQ96N64 755 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 FERD3LQ96RJ6 166 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 KIFC1Q9BW19 673 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 SLC40A1Q9NP59 571 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 DKK4Q9UBT3 224 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PCYOX1Q9UHG3 505 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 PCDHGA8Q9Y5G5 932 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 RPS6KL1Q9Y6S9 549 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 ADAMTS20P59510 1910 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 APC2O95996 2303 aa8.17□□□□□ -1.1
CTNNA1-231ENST00000521941 C17orf113A0A1B0GUU1 675 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 KLHL33A6NCF5 533 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 SDR42E2A6NKP2 422 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 EFCAB8A8MWE9 144 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 F8W8V4 182 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 PRMT5O14744 637 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 RRP8O43159 456 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 KIF1CO43896 1103 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 ITGA2BP08514 1039 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 MLNP12872 115 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 ARNTP27540 789 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 FMO4P31512 558 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 SLC5A2P31639 672 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 EIF2S3P41091 472 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 ABCG1P45844 678 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 ETF1P62495 437 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 DHX9Q08211 1270 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 HSPA14Q0VDF9 509 aa8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 MN1Q10571 1320 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-231ENST00000521941 ACACAQ13085 2346 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms