RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ZMPSTE24O75844 475 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 SRP54P61011 504 aaKnown RBP15.99■□□□□ 0.15
USP42-207ENST00000521713 SH3PXD2AQ5TCZ1 1133 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 RNF19BQ6ZMZ0 732 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 SPATA19Q7Z5L4 167 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 OFCC1Q8IZS5 231 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 GJA1P17302 382 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 GPAT3Q53EU6 434 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 RALGPS1Q5JS13 557 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 GRASPQ7Z6J2 395 aaPredicted RBP15.99■□□□□ 0.15
USP42-207ENST00000521713 ZC3H7AQ8IWR0 971 aaKnown RBP15.99■□□□□ 0.15
USP42-207ENST00000521713 ARL10Q8N8L6 244 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 OR2AP1Q8NGE2 309 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 NACC2Q96BF6 587 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 TELO2Q9Y4R8 837 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 ATP6AP2A0A1C7CYW4 349 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 ATP6AP2O75787 350 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 CLDN9O95484 217 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 FECHP22830 423 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 RUNDC3AQ59EK9 446 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 GCNT7Q6ZNI0 430 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 OR2T34Q8NGX1 318 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 OR2T3Q8NH03 318 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 ZNF671Q8TAW3 534 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 RAB2BQ8WUD1 216 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 PRDM8Q9NQV8 689 aa15.99■□□□□ 0.15
USP42-207ENST00000521713 SLC22A3O75751 556 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 FYNP06241 537 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 EPHA3P29320 983 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 RFTN2Q52LD8 501 aaPredicted RBP15.98■□□□□ 0.15
USP42-207ENST00000521713 EOGTQ5NDL2 527 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 ADGRD1Q6QNK2 874 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 SNX20Q7Z614 316 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 NXNL1Q96CM4 212 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 OR52E6Q96RD3 313 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 CXorf21Q9HAI6 301 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 EXD2Q9NVH0 621 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 MAT2AP31153 395 aaKnown RBP15.98■□□□□ 0.15
USP42-207ENST00000521713 MPP1Q00013 466 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 UBXN11Q5T124 520 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 ANKRD22Q5VYY1 191 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 THOC7Q6I9Y2 204 aaKnown RBP15.98■□□□□ 0.15
USP42-207ENST00000521713 SULT1C3Q6IMI6 304 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 MACC1Q6ZN28 852 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 HID1Q8IV36 788 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 AJAP1Q9UKB5 411 aaPredicted RBP15.98■□□□□ 0.15
USP42-207ENST00000521713 PCDHGB3Q9Y5G1 929 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 EDDM13A0A1B0GTR0 161 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 RCVRNP35243 200 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 CCNFP41002 786 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 KCNQ1P51787 676 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 DGKEP52429 567 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 GMFBP60983 142 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 LSM3P62310 102 aaKnown RBP15.98■□□□□ 0.15
USP42-207ENST00000521713 ASTE1Q2TB18 679 aaPredicted RBP15.98■□□□□ 0.15
USP42-207ENST00000521713 GALNT18Q6P9A2 607 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
USP42-207ENST00000521713 ZNF607Q96SK3 696 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 RAB11FIP5Q9BXF6 653 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 ADAMTS10Q9H324 1103 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 CMTM6Q9NX76 183 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 SMPD3Q9NY59 655 aaPredicted RBP15.98■□□□□ 0.15
USP42-207ENST00000521713 IL36AQ9UHA7 158 aa15.98■□□□□ 0.15
USP42-207ENST00000521713 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 SIN3BO75182 1162 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 NMBRP28336 390 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 CSNK2BP67870 215 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 KHDC1Q4VXA5 237 aaKnown RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 MORN1Q5T089 497 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 CPTPQ5TA50 214 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 SLC39A5Q6ZMH5 540 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 VN1R5Q7Z5H4 357 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 ERI1Q8IV48 349 aaKnown RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 FAM20CQ8IXL6 584 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 MOSPD2Q8NHP6 518 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 PFDN2Q9UHV9 154 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 ZNF222Q9UK12 451 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 ZNF490Q9ULM2 529 aaPredicted RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 HS3ST4Q9Y661 456 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 TRBV23OR9-2A0A075B6M9 112 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 NRP2O60462 931 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 DNAJA2O60884 412 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 HNRNPA1P09651 372 aaKnown RBP eCLIP15.97■□□□□ 0.15
USP42-207ENST00000521713 MANFP55145 182 aaKnown RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 CYP1B1Q16678 543 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 UPP1Q16831 310 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 LDB1Q86U70 411 aaPredicted RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 SLC35B2Q8TB61 432 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 EEF1AKMT1Q8WVE0 214 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 KIFC1Q9BW19 673 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 LRTM1Q9HBL6 345 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 SLC22A2O15244 555 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 ECDO95905 644 aaPredicted RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 SLC7A2P52569 658 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 TEAD2Q15562 447 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 CHST15Q7LFX5 561 aaPredicted RBP15.97■□□□□ 0.15
USP42-207ENST00000521713 DNAJB14Q8TBM8 379 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 SLC38A3Q99624 504 aa15.97■□□□□ 0.15
USP42-207ENST00000521713 IPPKQ9H8X2 491 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms