RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 FANCD2Q9BXW9 1451 aa4.35□□□□□ -1.71
CTNNA1-222ENST00000520400 A0A0B4J293 547 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 A0A1B0GUV1 79 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 PLSCR5A0PG75 271 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 SMTNL1A8MU46 457 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CLGNO14967 610 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 SLC16A5O15375 505 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 ABCB1P08183 1280 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 ACP2P11117 423 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CYP11B2P19099 503 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CBLP22681 906 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CPT2P23786 658 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CCR3P51677 355 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 KRT33BQ14525 404 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 TMEM35AQ53FP2 167 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 C6orf163Q5TEZ5 329 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 DHRS7BQ6IAN0 325 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CAPRIN2Q6IMN6 1127 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 TUBA1AQ71U36 451 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 DGLUCYQ7Z3D6 616 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 PIWIL4Q7Z3Z4 852 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CAMKMTQ7Z624 323 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 TC2NQ8N9U0 490 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 OR10S1Q8NGN2 331 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 TMEM255BQ8WV15 326 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 TEKT4Q8WW24 435 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 SMPDL3BQ92485 455 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 SEMA4DQ92854 862 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 SECISBP2LQ93073 1101 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 LINGO1Q96FE5 620 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CDCA5Q96FF9 252 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 THOC3Q96J01 351 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 FAM81BQ96LP2 452 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 TUBA1CQ9BQE3 449 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 ABHD6Q9BV23 337 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 MRPL1Q9BYD6 325 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 DPAGT1Q9H3H5 408 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 CHMP1AQ9HD42 196 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 TAB2Q9NYJ8 693 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 PCDHGB1Q9Y5G3 927 aa4.34□□□□□ -1.71
CTNNA1-222ENST00000520400 AQRO60306 1485 aaKnown RBP eCLIP4.34□□□□□ -1.718e-7■■■■■ 28.7
CTNNA1-222ENST00000520400 DIP2BQ9P265 1576 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 SOS1Q07889 1333 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 TMEM221A6NGB7 291 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 XRCC3O43542 346 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 SYNCRIPO60506 623 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 DIAPH2O60879 1101 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 KRT19P08727 400 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 T-ENOLP0DO92 83 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 DAOP14920 347 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 CCKBRP32239 447 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 GNL1P36915 607 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 USP8P40818 1118 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 AMPHP49418 695 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 ARSEP51690 589 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 SNRPEP62304 92 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 PLIN5Q00G26 463 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 ALCAMQ13740 583 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 IZUMO4Q1ZYL8 232 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 LETM2Q2VYF4 491 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 CBWD6Q4V339 395 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 CBWD3Q5JTY5 395 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 RNASEH2BQ5TBB1 312 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 GRTP1Q5TC63 336 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 ARMC3Q5W041 872 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 SFR1Q86XK3 245 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 CRYBG2Q8N1P7 616 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 ZNF843Q8N446 348 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 OR6J1Q8NGC5 347 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 MOAP1Q96BY2 351 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 NXNL1Q96CM4 212 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 OR10A4Q9H209 315 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 C6orf106Q9H6K1 298 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 CCDC177Q9NQR7 707 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 TUBE1Q9UJT0 475 aa4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 PPIEQ9UNP9 301 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-222ENST00000520400 CCDC88BA6NC98 1476 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 LOC100509620A0A075B734 347 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 TRBC2A0A5B9 178 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 KRTAP29-1A8MX34 341 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 SSX4O60224 188 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 BMP10O95393 424 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 LIPFP07098 398 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 FGF3P11487 239 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 GAGE2BQ13066 116 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 SNAPC1Q16533 368 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 C9orf152Q5JTZ5 239 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 FAM109BQ6ICB4 259 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 GAGE2AQ6NT46 116 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 UNQ6126/PRO20091Q6UXV3 157 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 ZNF704Q6ZNC4 412 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 RBPMS2Q6ZRY4 209 aaKnown RBP4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 ANO5Q75V66 913 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 PTOV1Q86YD1 416 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 FAM114A1Q8IWE2 563 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 AFAP1Q8N556 730 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 DNAAF4Q8WXU2 420 aa4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 DAZLQ92904 295 aaKnown RBP4.32□□□□□ -1.72
CTNNA1-222ENST00000520400 IGSF21Q96ID5 467 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms