RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ZNF124Q15973 351 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 C15orf59Q2T9L4 293 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 TNFAIP8L3Q5GJ75 292 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 TFDP3Q5H9I0 405 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 KCNT1Q5JUK3 1230 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 OTUD1Q5VV17 481 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 SNX30Q5VWJ9 437 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 OR6B2Q6IFH4 312 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 PMF1Q6P1K2 205 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 ACSM6Q6P461 480 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 KIAA1324Q6UXG2 1013 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 HOOK3Q86VS8 718 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 UNC93AQ86WB7 457 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 CCDC25Q86WR0 208 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 LRRC56Q8IYG6 542 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 OR52L2PQ8NGH6 319 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 CLEC4CQ8WTT0 213 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 RXFP2Q8WXD0 754 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 PTCD3Q96EY7 689 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 ZNF560Q96MR9 790 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 TOX2Q96NM4 488 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 PRR25Q96S07 402 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 ADOQ96SZ5 270 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 ADAM2Q99965 735 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 WDR83Q9BRX9 315 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 CNPY3Q9BT09 278 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 MTG1Q9BT17 334 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 CAPS2Q9BXY5 557 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 LMAN2LQ9H0V9 348 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 CENPHQ9H3R5 247 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 RABEP2Q9H5N1 569 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 SYNCQ9H7C4 482 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 C10orf88Q9H8K7 445 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 SAP30LQ9HAJ7 183 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 PCDH9Q9HC56 1237 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 HOMER3Q9NSC5 361 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 TBCCD1Q9NVR7 557 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 GPATCH2LQ9NWQ4 482 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 GDAP2Q9NXN4 497 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 TAS2R10Q9NYW0 307 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 CACNG4Q9UBN1 327 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 GABRQQ9UN88 632 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 SH2B3Q9UQQ2 575 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 ENTPD2Q9Y5L3 495 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 TRPV2Q9Y5S1 764 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 HTTP42858 3142 aa4.86□□□□□ -1.63
CTNNA1-212ENST00000518919 SH2D7A6NKC9 451 aaPredicted RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 SMIM23A6NLE4 172 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 AP3D1O14617 1153 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 TMPRSS11DO60235 418 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 CST8O60676 142 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 PTP4A3O75365 173 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 GRAP2O75791 330 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 TJP3O95049 919 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 SPDEFO95238 335 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 ACSL3O95573 720 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 ONECUT2O95948 504 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 PGK1P00558 417 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 CLEC3BP05452 202 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 KRT7P08729 469 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 ALOX12P18054 663 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 MATN1P21941 496 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 WARSP23381 471 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 KDELR1P24390 212 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 LMO2P25791 158 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 ACRV1P26436 265 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 ADORA2BP29275 332 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 EPHA8P29322 1005 aaPredicted RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 KRT20P35900 424 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 ARL3P36405 182 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 MDH1P40925 334 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 TAF6P49848 677 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 HDAC4P56524 1084 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 FOXL2P58012 376 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 DYNLT1P63172 113 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 IFI35P80217 286 aaPredicted RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 OTUD4Q01804 1114 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 CAV1Q03135 178 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 PPARDQ03181 441 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 GAD2Q05329 585 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 PRKCZQ05513 592 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 DEUP1Q05D60 604 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 IFFO1Q0D2I5 559 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 BST2Q10589 180 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 SREBF2Q12772 1141 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 BYSLQ13895 437 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 DPYSL3Q14195 570 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 SLMAPQ14BN4 828 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 FASTKD3Q14CZ7 662 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 PTGISQ16647 500 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 CA9Q16790 459 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 HADHQ16836 314 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 PRICKLE4Q2TBC4 344 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 CCDC14Q49A88 953 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 RNASEH2BQ5TBB1 312 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 ANKRD22Q5VYY1 191 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 CXCL17Q6UXB2 119 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 LEKR1Q6ZMV7 388 aa4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 TRMT10CQ7L0Y3 403 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-212ENST00000518919 PXKQ7Z7A4 578 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms