RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 NCBP2P52298 156 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRIM41-209ENST00000515834 TMEM126BQ8IUX1 230 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 WDR60Q8WVS4 1066 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 PSMG2Q969U7 264 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 FUT8Q9BYC5 575 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 CTPS2Q9NRF8 586 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 INPPL1O15357 1258 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 DDX3YO15523 660 aaKnown RBP10.88□□□□□ -0.67
TRIM41-209ENST00000515834 NRP2O60462 931 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 CCR10P46092 362 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 STRADAQ7RTN6 431 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 TOP1MTQ969P6 601 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 NXNL1Q96CM4 212 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 BTBD1Q9H0C5 482 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 ADAP2Q9NPF8 381 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 CDC14AQ9UNH5 594 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 NEMP2A6NFY4 417 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 KCNU1A8MYU2 1149 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 AKAP8O43823 692 aaKnown RBP10.88□□□□□ -0.67
TRIM41-209ENST00000515834 MPSTP25325 297 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 RPS6KA3P51812 740 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 VBP1P61758 197 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 FCHO2Q0JRZ9 810 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 BST1Q10588 318 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 BNIP2Q12982 314 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 CHRDL2Q6WN34 429 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 SPATA19Q7Z5L4 167 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 XYLT1Q86Y38 959 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 KBTBD8Q8NFY9 601 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 RIT1Q92963 219 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 FAM129BQ96TA1 746 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 ACBD6Q9BR61 282 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 SEC61A2Q9H9S3 476 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 ZC3H13Q5T200 1668 aaKnown RBP10.88□□□□□ -0.67
TRIM41-209ENST00000515834 FAM227AF5H4B4 570 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 RASGEF1BQ0VAM2 473 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 IL18R1Q13478 541 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 ZACNQ401N2 412 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 LRRC38Q5VT99 294 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 GRASPQ7Z6J2 395 aaPredicted RBP10.88□□□□□ -0.67
TRIM41-209ENST00000515834 SLC22A17Q8WUG5 538 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 PLEKHG4BQ96PX9 1271 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 CPXM1Q96SM3 734 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 BCO2Q9BYV7 579 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 CHRAC1Q9NRG0 131 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 POLR3BQ9NW08 1133 aaPredicted RBP10.88□□□□□ -0.67
TRIM41-209ENST00000515834 FKBPLQ9UIM3 349 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
TRIM41-209ENST00000515834 AP2A2O94973 939 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 POU2F1P14859 743 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 NT5DC1Q5TFE4 455 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 CLEC6AQ6EIG7 209 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 C1orf94Q6P1W5 598 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 IQCHQ86VS3 1027 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 ARMC10Q8N2F6 343 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 SLC35G5Q96KT7 338 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 MRIQ9BWK5 157 aa10.88□□□□□ -0.67
TRIM41-209ENST00000515834 IRGMA1A4Y4 181 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 ELOA3DA6NLF2 546 aaPredicted RBP10.87□□□□□ -0.67
TRIM41-209ENST00000515834 TNFRSF11BO00300 401 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 HDAC3O15379 428 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 TBX1O43435 398 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 PSMG1O95456 288 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 SERPINA3P01011 423 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 CYP17A1P05093 508 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 HOXB2P14652 356 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 NELFEP18615 380 aaKnown RBP10.87□□□□□ -0.67
TRIM41-209ENST00000515834 EIF1AXP47813 144 aaKnown RBP10.87□□□□□ -0.67
TRIM41-209ENST00000515834 CCR3P51677 355 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 CASP6P55212 293 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 ECT2LQ008S8 904 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 ELOA3BQ3SY89 546 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 CARD16Q5EG05 197 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 TAC4Q86UU9 113 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 PYROXD2Q8N2H3 581 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 ELOA3Q8NG57 546 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 OR6K6Q8NGW6 343 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 TWIST2Q8WVJ9 160 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 GTPBP3Q969Y2 492 aaKnown RBP10.87□□□□□ -0.67
TRIM41-209ENST00000515834 GSDMCQ9BYG8 508 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 PCBD2Q9H0N5 130 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 METTL7AQ9H8H3 244 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 DKKL1Q9UK85 242 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 FRMPD1Q5SYB0 1578 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 MYBPHLA2RUH7 354 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 FAM155BO75949 473 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 ZNF20P17024 532 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 CXCR1P25024 350 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 HSD3B2P26439 372 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 HSD11B1P28845 292 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 TXNL4AP83876 142 aaKnown RBP10.87□□□□□ -0.67
TRIM41-209ENST00000515834 STRADBQ9C0K7 418 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 GRIP1Q9Y3R0 1128 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 PPRC1Q5VV67 1664 aaKnown RBP10.87□□□□□ -0.67
TRIM41-209ENST00000515834 NRP1O14786 923 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 RENP00797 406 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 COL6A1P12109 1028 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 DNAJB7Q7Z6W7 309 aaPredicted RBP10.87□□□□□ -0.67
TRIM41-209ENST00000515834 KXD1Q9BQD3 176 aa10.87□□□□□ -0.67
TRIM41-209ENST00000515834 IKZF4Q9H2S9 585 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms