RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ACADVLP49748 655 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 CLCNKAP51800 687 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ACTR1AP61163 376 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 FOXC1Q12948 553 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 NFATC2Q13469 925 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 CRYMQ14894 314 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 TCEA2Q15560 299 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 PDK4Q16654 411 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 CCDC157Q569K6 752 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 TSTD2Q5T7W7 516 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 LGSNQ5TDP6 509 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 SLC30A9Q6PML9 568 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 TMEM220Q6QAJ8 160 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 CHST15Q7LFX5 561 aaPredicted RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 TAS2R42Q7RTR8 314 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 EFL1Q7Z2Z2 1120 aaKnown RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 RAB44Q7Z6P3 723 aaPredicted RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 LRRTM4Q86VH4 590 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 SLC35F3Q8IY50 421 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 CHCHD4Q8N4Q1 142 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 DDHD1Q8NEL9 900 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 PPHLN1Q8NEY8 458 aaKnown RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 ACMSDQ8TDX5 336 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ZDHHC1Q8WTX9 485 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 PEX13Q92968 403 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 NAT6Q93015 286 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ISL2Q96A47 359 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 DCUN1D1Q96GG9 259 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ZNF514Q96K75 400 aaPredicted RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 DNAJC1Q96KC8 554 aaKnown RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 KIFC1Q9BW19 673 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ZCCHC2Q9C0B9 1178 aaKnown RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 IL22Q9GZX6 179 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ABCG4Q9H172 646 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 MRM3Q9HC36 420 aaKnown RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 NKIRAS1Q9NYS0 192 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 CRLS1Q9UJA2 301 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 PRDM4Q9UKN5 801 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 PRKAB1Q9Y478 270 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ST14Q9Y5Y6 855 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 FAM169AQ9Y6X4 670 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 U3KQA8 63 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 TRBV5-4A0A0C4DH59 114 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ZCWPW2A0A1B0GU75 182 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 OR5K4A6NMS3 321 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CCL22O00626 93 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 NOBOXO60393 691 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 MTX2O75431 263 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 RFPL1O75677 317 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 POP7O75817 140 aaKnown RBP8.18□□□□□ -1.1
CCL28-204ENST00000514421 KRT37O76014 449 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 KRT38O76015 456 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 RALBP11234 206 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ACP5P13686 325 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 PNLIPP16233 465 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 TAC1P20366 129 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 MGAT1P26572 445 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CA5AP35218 305 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 RPA3P35244 121 aaPredicted RBP8.18□□□□□ -1.1
CCL28-204ENST00000514421 ETV4P43268 484 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CCT5P48643 541 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CSRP3P50461 194 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ARSDP51689 593 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ACVR1Q04771 509 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CACNG1Q06432 222 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 MGAT5Q09328 741 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ITIH4Q14624 930 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 SMAD1Q15797 465 aaKnown RBP8.18□□□□□ -1.1
CCL28-204ENST00000514421 KHDC1Q4VXA5 237 aaKnown RBP8.18□□□□□ -1.1
CCL28-204ENST00000514421 C14orf28Q4W4Y0 310 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ZRANB3Q5FWF4 1079 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 GKAP1Q5VSY0 366 aaPredicted RBP8.18□□□□□ -1.1
CCL28-204ENST00000514421 TRMT10BQ6PF06 316 aaKnown RBP8.18□□□□□ -1.1
CCL28-204ENST00000514421 DHRS13Q6UX07 377 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CAPN12Q6ZSI9 719 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 TMPRSS7Q7RTY8 843 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 AMZ2Q86W34 360 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 TMPRSS12Q86WS5 348 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 C17orf82Q86X59 251 aaPredicted RBP8.18□□□□□ -1.1
CCL28-204ENST00000514421 ZNF547Q8IVP9 402 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CACTIN-AS1Q8N1I8 211 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 NXPE1Q8N323 547 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 GALNT15Q8N3T1 639 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ARL14Q8N4G2 192 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 ANKS4BQ8N8V4 417 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 RASGEF1AQ8N9B8 481 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 OR6P1Q8NGX9 317 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 IFI44Q8TCB0 444 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 HDAC10Q969S8 669 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 GRAMD1AQ96CP6 724 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 SGF29Q96ES7 293 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 CFAP36Q96G28 342 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 APOPT1Q96IL0 206 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 SEC16BQ96JE7 1060 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 TTC1Q99614 292 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 COPS8Q99627 209 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 TIMM29Q9BSF4 260 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 VPS11Q9H270 941 aa8.18□□□□□ -1.1
CCL28-204ENST00000514421 FAM96AQ9H5X1 160 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms