RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ZCCHC2Q9C0B9 1178 aaKnown RBP11.11□□□□□ -0.63
TCOF1-211ENST00000513346 CPNE5Q9HCH3 593 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 KLHL1Q9NR64 748 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 AASDHPPTQ9NRN7 309 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 PFDN2Q9UHV9 154 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 PADI3Q9ULW8 664 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 NENFQ9UMX5 172 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 ALDOAP04075 364 aaKnown RBP11.11□□□□□ -0.63
TCOF1-211ENST00000513346 FABP3P05413 133 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 CD83Q01151 205 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 ACSM2AQ08AH3 577 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 BOP1Q14137 746 aaKnown RBP11.11□□□□□ -0.63
TCOF1-211ENST00000513346 ACSM2BQ68CK6 577 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 ESRP1Q6NXG1 681 aaKnown RBP11.11□□□□□ -0.63
TCOF1-211ENST00000513346 IGFN1Q86VF2 1251 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 ZDHHC21Q8IVQ6 265 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 SUSD6Q92537 303 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 BIRC7Q96CA5 298 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 C1GALT1C1Q96EU7 318 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 RDH12Q96NR8 316 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 PANX1Q96RD7 426 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 ITPAQ9BY32 194 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 DUSP16Q9BY84 665 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 AKTIPQ9H8T0 292 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 POLE3Q9NRF9 147 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 B3GNT3Q9Y2A9 372 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 FABP12A6NFH5 140 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 I3L521 148 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 SOCS2O14508 198 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 UROSP10746 265 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 GCAP28676 217 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 OR1D2P34982 312 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 HNRNPFP52597 415 aaKnown RBP11.11□□□□□ -0.63
TCOF1-211ENST00000513346 MS4A2Q01362 244 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 SLC24A5Q71RS6 500 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 OTOP3Q7RTS5 596 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 STK40Q8N2I9 435 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 GFM1Q96RP9 751 aaKnown RBP11.11□□□□□ -0.63
TCOF1-211ENST00000513346 SYT11Q9BT88 431 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 ACAT2Q9BWD1 397 aa11.11□□□□□ -0.63
TCOF1-211ENST00000513346 ZNF717Q9BY31 904 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-211ENST00000513346 FAM234BA2RU67 622 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 OR6C75A6NL08 312 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CASKO14936 926 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 BMP2P12643 396 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 IMPDH1P20839 514 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PTPN3P26045 913 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ANXA11P50995 505 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 MTPNP58546 118 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 IL18Q14116 193 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 FNDC3BQ53EP0 1204 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 C6orf141Q5SZD1 244 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 FAM182AQ5T1J6 154 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 RASAL3Q86YV0 1011 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CLIP4Q8N3C7 705 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 GALNT6Q8NCL4 622 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ZNF597Q96LX8 424 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ZFP42Q96MM3 310 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ZYG11BQ9C0D3 744 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 TCAF1Q9Y4C2 921 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PSAT1Q9Y617 370 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SPACA6W5XKT8 324 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PHRF1Q9P1Y6 1649 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CNTNAP1P78357 1384 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 FGBP02675 491 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 TCEA1P23193 301 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 DNAJB1P25685 340 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 GPC1P35052 558 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CRATP43155 626 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SMAD3P84022 425 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PRKCZQ05513 592 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 DPYSL2Q16555 572 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 TMEM236Q5W0B7 351 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PMF1Q6P1K2 205 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ERICH5Q6P6B1 374 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 UBE2J2Q8N2K1 259 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CSGALNACT1Q8TDX6 532 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PIH1D2Q8WWB5 315 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 CNPPD1Q9BV87 410 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 NPLQ9BXD5 320 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 A8MX80 341 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 TLL1O43897 1013 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 TLR5O60602 858 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SELPP16109 830 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SMPD1P17405 629 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 GLUD2P49448 558 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 NKX2-5P52952 324 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 ACOX1Q15067 660 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SLC2A7Q6PXP3 512 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 DET1Q7L5Y6 550 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 DENND1CQ8IV53 801 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 PLD6Q8N2A8 252 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 GMLQ99445 158 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
TCOF1-211ENST00000513346 NUSAP1Q9BXS6 441 aaKnown RBP11.1□□□□□ -0.63
TCOF1-211ENST00000513346 SOX17Q9H6I2 414 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms