RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PPP1R14CQ8TAE6 165 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 ZNF473Q8WTR7 871 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 ZCCHC14Q8WYQ9 949 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 NXNL1Q96CM4 212 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 PAIP2Q9BPZ3 127 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 RIOK2Q9BVS4 552 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 GTPBP2Q9BX10 602 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 C1QTNF2Q9BXJ5 285 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 PITPNM3Q9BZ71 974 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 TPSD1Q9BZJ3 242 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 DNAAF2Q9NVR5 837 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 NCKIPSDQ9NZQ3 722 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 XPR1Q9UBH6 696 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 RUVBL2Q9Y230 463 aaKnown RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 NCKAP1Q9Y2A7 1128 aa8.97□□□□□ -0.97
NR1I3-228ENST00000511676 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-228ENST00000511676 SDK1Q7Z5N4 2213 aa8.96□□□□□ -0.97
NR1I3-228ENST00000511676 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 C10orf142B7Z368 130 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 NUAK1O60285 661 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 LZTS3O60299 673 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 OR1I1O60431 355 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 NPHS1O60500 1241 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 SMIM24O75264 130 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TM7SF2O76062 418 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 IPO13O94829 963 aaKnown RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 HOXC4P09017 264 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 ENO2P09104 434 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 PRSS56P0CW18 603 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TPBGLP0DKB5 382 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 MPC1LP0DKB6 136 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 FGF3P11487 239 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 UGT1A6P19224 532 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TFEBP19484 476 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 CHRM3P20309 590 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 MSH3P20585 1137 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 SAT1P21673 171 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 UGT1A1P22309 533 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 UGT1A4P22310 534 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 UGT1A3P35503 534 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 UGT1A5P35504 534 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 PRLHRP49683 370 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 SEC24CP53992 1094 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 B4GALNT1Q00973 533 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 DLG1Q12959 904 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 STX3Q13277 289 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 SP140Q13342 867 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TRIP6Q15654 476 aaKnown RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 CHI3L2Q15782 390 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TMEM259Q4ZIN3 620 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TTC19Q6DKK2 380 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TMEM207Q6UWW9 146 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 SPATA21Q7Z572 469 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 ISCA2Q86U28 154 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TRIM69Q86WT6 500 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TMPRSS6Q8IU80 811 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TMEFF1Q8IYR6 380 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 CACNA2D3Q8IZS8 1091 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 ZBTB2Q8N680 514 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 GLMNQ92990 594 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 L3HYPDHQ96EM0 354 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 SIPA1Q96FS4 1042 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 SCYL1Q96KG9 808 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 LINC00615Q96LM1 132 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 LENG8Q96PV6 779 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 ATOH8Q96SQ7 321 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 GPR21Q99679 349 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 C1QTNF3Q9BXJ4 246 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TRIM55Q9BYV6 548 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 MKRN2Q9H000 416 aaKnown RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 RDH14Q9HBH5 336 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 SGK2Q9HBY8 427 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 MLXIPLQ9NP71 852 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 FGFR1OP2Q9NVK5 253 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 KLHL14Q9P2G3 628 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 TMPRSS11EQ9UL52 423 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 GPR34Q9UPC5 381 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 PCDHGB2Q9Y5G2 931 aa8.96□□□□□ -0.98
NR1I3-228ENST00000511676 DNMT3AQ9Y6K1 912 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 ATXN2Q99700 1313 aaKnown RBP8.96□□□□□ -0.98
NR1I3-228ENST00000511676 C17orf113A0A1B0GUU1 675 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 MEI4A8MW99 385 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 FADS2P1A8MWK0 482 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 A8MX80 341 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 SLCO1B7G3V0H7 640 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 STX16-NPEPL1H3BU86 382 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 TK2O00142 265 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 STX16O14662 325 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 GPR37O15354 613 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 SLC16A5O15375 505 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 YKT6O15498 198 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 KLK8O60259 260 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 KCNJ13O60928 360 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 NIPSNAP2O75323 286 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 SLC25A14O95258 325 aaPredicted RBP8.95□□□□□ -0.98
NR1I3-228ENST00000511676 TOP3BO95985 862 aaKnown RBP8.95□□□□□ -0.98
NR1I3-228ENST00000511676 SOD1P00441 154 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 SBK3P0C264 359 aa8.95□□□□□ -0.98
NR1I3-228ENST00000511676 AOAHP28039 575 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms