RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 HOXC4P09017 264 aaPredicted RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 TMEM253P0C7T8 217 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CCNB1P14635 433 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 LIFP15018 202 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 LHCGRP22888 699 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 EEF1GP26641 437 aaKnown RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 CD1CP29017 333 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ALDH4A1P30038 563 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 UGT1A3P35503 534 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ERVFRD-1P60508 538 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ACOX1Q15067 660 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 KRT31Q15323 416 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SKIDA1Q1XH10 827 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 FIGNQ5HY92 759 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 PNCKQ6P2M8 343 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 DNAJC24Q6P3W2 148 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SLC30A9Q6PML9 568 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TRIM72Q6ZMU5 477 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CYP4V2Q6ZWL3 525 aaPredicted RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 PIM3Q86V86 326 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 HEATR4Q86WZ0 1026 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ZNF761Q86XN6 746 aaPredicted RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 NAGSQ8N159 534 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 KIAA1524Q8TCG1 905 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SEC14L1Q92503 715 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ART4Q93070 314 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TMEM159Q96B96 161 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 NUS1Q96E22 293 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CCDC120Q96HB5 630 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 COQ10AQ96MF6 247 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TUBGCP5Q96RT8 1024 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SYT3Q9BQG1 590 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 YIPF4Q9BSR8 244 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CNPY3Q9BT09 278 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 FRMD8Q9BZ67 464 aaPredicted RBP6.61□□□□□ -1.35
COPS4-209ENST00000511653 SLC25A18Q9H1K4 315 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 TAAR2Q9P1P5 351 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 KLHL14Q9P2G3 628 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SUFUQ9UMX1 484 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 SPO11Q9Y5K1 396 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 ATP23Q9Y6H3 246 aa6.61□□□□□ -1.35
COPS4-209ENST00000511653 CFAP69A5D8W1 941 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 DFFAO00273 331 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 EEF2KO00418 725 aaKnown RBP6.6□□□□□ -1.35
COPS4-209ENST00000511653 PPM1DO15297 605 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 DUX1O43812 170 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 PALMO75781 387 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 THRAP10827 490 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 RAC2P15153 192 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 TNFAIP3P21580 790 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 KELP23276 732 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 CD82P27701 267 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 GNPDA1P46926 289 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 CSNK1DP48730 415 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 POLD2P49005 469 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 NDST2P52849 883 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 LIMK2P53671 638 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 POLE2P56282 527 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 PRR5P85299 388 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 BCL2L1Q07817 233 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 GRM3Q14832 879 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 TERF2Q15554 542 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 DENND2CQ68D51 928 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 DOK6Q6PKX4 331 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 CBLL1Q75N03 491 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 HSD11B1LQ7Z5J1 315 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.6□□□□□ -1.35
COPS4-209ENST00000511653 ARFGAP1Q8N6T3 406 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 ZNF564Q8TBZ8 553 aaPredicted RBP6.6□□□□□ -1.35
COPS4-209ENST00000511653 FNIP1Q8TF40 1166 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 DTD2Q96FN9 168 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 SMIM14Q96QK8 99 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 SNRNP25Q9BV90 132 aaKnown RBP6.6□□□□□ -1.35
COPS4-209ENST00000511653 CINPQ9BW66 212 aaPredicted RBP6.6□□□□□ -1.35
COPS4-209ENST00000511653 TRIM7Q9C029 511 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 DHX35Q9H5Z1 703 aaKnown RBP6.6□□□□□ -1.35
COPS4-209ENST00000511653 SEPT11Q9NVA2 429 aaKnown RBP6.6□□□□□ -1.35
COPS4-209ENST00000511653 RIC8BQ9NVN3 520 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 OCIAD1Q9NX40 245 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 TAS2R14Q9NYV8 317 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 PCDHGA3Q9Y5H0 932 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 CNTRLQ7Z7A1 2325 aa6.6□□□□□ -1.35
COPS4-209ENST00000511653 IGHV1OR21-1A0A087WYE8 117 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 NPIPB15A6NHN6 443 aaPredicted RBP6.59□□□□□ -1.35
COPS4-209ENST00000511653 ARHGAP42A6NI28 874 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 RHPN2P1A8MT19 583 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 HEXIM1O94992 359 aaKnown RBP6.59□□□□□ -1.35
COPS4-209ENST00000511653 EML2O95834 649 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 SOD1P00441 154 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 SFTPCP11686 197 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 ERCC2P18074 760 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 ADCY8P40145 1251 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 STAT1P42224 750 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 CDK3Q00526 305 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 SLC10A7Q0GE19 358 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 ILF3Q12906 894 aaKnown RBP eCLIP6.59□□□□□ -1.35
COPS4-209ENST00000511653 TRAF2Q12933 501 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 PDCD1Q15116 288 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 SYCP1Q15431 976 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms