RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CCDC137Q6PK04 289 aaKnown RBP19.44■□□□□ 0.7
SFXN1-209ENST00000508290 C19orf48Q6RUI8 117 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 CARFQ8N187 725 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 OR6P1Q8NGX9 317 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 USP7Q93009 1102 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 C9orf72Q96LT7 481 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 C12orf66Q96MD2 445 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 CD180Q99467 661 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 TMEM9Q9P0T7 183 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 PSMD13Q9UNM6 376 aa19.44■□□□□ 0.7
SFXN1-209ENST00000508290 CHD6Q8TD26 2715 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 MATN2O00339 956 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 GOT2P00505 430 aaKnown RBP19.43■□□□□ 0.7
SFXN1-209ENST00000508290 FGF3P11487 239 aaPredicted RBP19.43■□□□□ 0.7
SFXN1-209ENST00000508290 ITPKBP27987 946 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 TTPAP49638 278 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 CDKN1CP49918 316 aaPredicted RBP19.43■□□□□ 0.7
SFXN1-209ENST00000508290 SESN2P58004 480 aaPredicted RBP19.43■□□□□ 0.7
SFXN1-209ENST00000508290 KRT33BQ14525 404 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 DCAF12Q5T6F0 453 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 PRSS42Q7Z5A4 293 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 PDZD3Q86UT5 571 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 MS4A14Q96JA4 679 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 INSM2Q96T92 566 aaPredicted RBP19.43■□□□□ 0.7
SFXN1-209ENST00000508290 KIFC1Q9BW19 673 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 AP1M1Q9BXS5 423 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 KIR3DX1Q9H7L2 352 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 XAB2Q9HCS7 855 aaKnown RBP19.43■□□□□ 0.7
SFXN1-209ENST00000508290 FBXO8Q9NRD0 319 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 OGFRQ9NZT2 677 aa19.43■□□□□ 0.7
SFXN1-209ENST00000508290 PRAMEF33A0A0G2JMD5 474 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 MAGEB16A2A368 324 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 CCDC78A2IDD5 438 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 C9orf172C9J069 976 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 STMND1H3BQB6 276 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 PFDN6O15212 129 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 CAPN5O15484 640 aaPredicted RBP19.42■□□□□ 0.7
SFXN1-209ENST00000508290 PRAMEF10O60809 474 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 CCL4P13236 92 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 TYRP1P17643 537 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 MPSTP25325 297 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 MC2RQ01718 297 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 KCNJ11Q14654 390 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 SNAP47Q5SQN1 464 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 TTC27Q6P3X3 843 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 FAM129CQ86XR2 697 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 CLDN19Q8N6F1 224 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 COG1Q8WTW3 980 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 PRORYQ9H606 182 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 MVB12BQ9H7P6 319 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 CHRAC1Q9NRG0 131 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 TREX1Q9NSU2 369 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 CATSPERZQ9NTU4 200 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 SLC39A1Q9NY26 324 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 SLC24A2Q9UI40 661 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 ITPR1Q14643 2758 aa19.42■□□□□ 0.7
SFXN1-209ENST00000508290 FAM208BQ5VWN6 2430 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 EFCAB7A8K855 629 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 POLBP06746 335 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 PAMP19021 973 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 ETV5P41161 510 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 CLN3Q13286 438 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 ZNF658BQ4V348 819 aaPredicted RBP19.41■□□□□ 0.7
SFXN1-209ENST00000508290 CEACAM20Q6UY09 585 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 ZNF534Q76KX8 674 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 OOSP2Q86WS3 158 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 LRRC6Q86X45 466 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 KMT5CQ86Y97 462 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 BMPERQ8N8U9 685 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 MCUQ8NE86 351 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 ACVR1CQ8NER5 493 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 GPR150Q8NGU9 434 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 SNRNP27Q8WVK2 155 aaKnown RBP19.41■□□□□ 0.7
SFXN1-209ENST00000508290 UBXN4Q92575 508 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 ART4Q93070 314 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 NAF1Q96HR8 494 aaKnown RBP19.41■□□□□ 0.7
SFXN1-209ENST00000508290 RMDN2Q96LZ7 410 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 ZNF778Q96MU6 729 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 RUNDC3BQ96NL0 473 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 OR52A5Q9H2C5 316 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 ZNF768Q9H5H4 540 aaKnown RBP19.41■□□□□ 0.7
SFXN1-209ENST00000508290 SLC2A6Q9UGQ3 507 aa19.41■□□□□ 0.7
SFXN1-209ENST00000508290 TEX51A0A1B0GUA7 166 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 OR5K3A6NET4 321 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 OR51F1A6NGY5 319 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 A8MU76 341 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 KDM1AO60341 852 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 PRSS56P0CW18 603 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 GNG11P61952 73 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 RNF187Q5TA31 235 aaPredicted RBP19.4■□□□□ 0.7
SFXN1-209ENST00000508290 MRNIPQ6NTE8 343 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 ARMC6Q6NXE6 501 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 XKR5Q6UX68 686 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 GPR155Q7Z3F1 870 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 DTX1Q86Y01 620 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 RSC1A1Q92681 617 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 SLCO2A1Q92959 643 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 FCRL3Q96P31 734 aaPredicted RBP19.4■□□□□ 0.7
SFXN1-209ENST00000508290 TGM7Q96PF1 710 aa19.4■□□□□ 0.7
SFXN1-209ENST00000508290 CCNL2Q96S94 520 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms